Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1123 TTGTACTGCACGCAGAAGGAAAAACCCAGAGCATACACCATCTTCGAACAAGGAAGAAGGCGCTCACGCACACTTCGAACGAGTAAGAAGGCAGAGCACGCACTAGCTACGAACGAGAACCCCATTCACGATCAATCAGTTGCGATTCTCTTTCCCGTCTTTTTATCTGCGTATAGTATTTTCTCAAGGCACTTGTATGTGATTCTCTTTCCCCTATTTCATATGTTTCTTCTATGCTGTGTTGTATTCATAGTAGTTACATTGATGGATACTTCAATCTCAACTAGTTCAAGTTTATTAAACAATGAAATTTCAGCTGAACTTCCTTTAGAAAATGAAGTCACAGAAACAGATTTAACTCCCTATGTTGGCATGAAGTTTGAGACTGAAGAACATGCCTATAGAGTTTATAATGCATATGCTGGCTTAATTGGATTTAGCATTAGAAGAGATTGGGTGAATAAAAGTAGGATGGATCAAAATACTTTAATATCTCAGAAATTTGTATGTTTCAAAGAAGGATTCAAGAAGATAAGTAATTGTGAAGCAAAGAAGACACAAATTACCATCACAAAGAAAATTTCTACTGCTCAAGCCGCTAAAATTGAATTGGCAAATAATTCTGGCATACAACagaaattaatttttgagtTTTTGAGTCGGCAAGTTGGAGGACGTGAGAATGTTGGATATACTCTTAAGGATGTTAGTAATCATTTGACTTCTATGAGGATGACAAAAATAAAGGAAGGCGAGGCCTACTCTTTGTTGGATTACTTTCAATCAAGGAAATCTGAGAACCcatcatttttttatgaaattcaaCTTGATGTTGAAGATGAAATCACAAACATCTTTTGGGCAGACGCAAAGATGATTGTAGATTATGTTTGTTTTGGAGATGTGGTATCTTTCGATACTACTTATTGTACGAACAAAAATTGTCGGCCCTTTGCACCCTTTGTTGGATTCAATCACCATCGTCAAACTATTATATTTGGTGCAACACTATTATATGATGAAACAGTTGAATCCTTTGAATGGTTGTTTAAGACTTTTCTTAAGGCCATGTGTGAGAACAAGCCAAAAACAATTTTTACAGATCAAGATGCCGCAATGGCCAAAGCAATTTCAGTGGTATTGCTTGAATCTTATCATCGTCTATGCACTTGGCATTTATTTCAAAATGCTCTCAAGAATGTCAATCATGCCTTTAAGAAGTCGGATTCTTTTGCTTCAGACTTGAGACGTTGTATTTATGACTACGAATATGAGGATAACTTTTTGAATGCTTGGAAGTCAATACTTGATAAGCATGACCTTCGTCAAAATATGTGGATGCAAGATTTATttcgaaaaaaagaaaaatgggcaTCAGTGTATGGGCGATATACTTTTTCAGCTGGTGCTACATCAACACAATTGAGTGAAAGTTTGAATGGTCGACTAAGAGGTTACATGAAGTCTACATTCAATGTGTTcgatttctttaagaattttgaGAGGTTGTTGAAGGATATGAGATACAAGGAGATAGAGGCTAAGTATGACATGAGTCAAAAAAAGCCACCACTGAGTTTAGACATCCTTTTGGTTAAGCCTGCATGA 1608 0.3495 LYCTQKEKPRAYTIFEQGRRRSRTLRTSKKAEHALATNENPIHDQSVAILFPVFLSAYSIFSRHLYVILFPLFHMFLLCCVVFIVVTLMDTSISTSSSLLNNEISAELPLENEVTETDLTPYVGMKFETEEHAYRVYNAYAGLIGFSIRRDWVNKSRMDQNTLISQKFVCFKEGFKKISNCEAKKTQITITKKISTAQAAKIELANNSGIQQKLIFEFLSRQVGGRENVGYTLKDVSNHLTSMRMTKIKEGEAYSLLDYFQSRKSENPSFFYEIQLDVEDEITNIFWADAKMIVDYVCFGDVVSFDTTYCTNKNCRPFAPFVGFNHHRQTIIFGATLLYDETVESFEWLFKTFLKAMCENKPKTIFTDQDAAMAKAISVVLLESYHRLCTWHLFQNALKNVNHAFKKSDSFASDLRRCIYDYEYEDNFLNAWKSILDKHDLRQNMWMQDLFRKKEKWASVYGRYTFSAGATSTQLSESLNGRLRGYMKSTFNVFDFFKNFERLLKDMRYKEIEAKYDMSQKKPPLSLDILLVKPA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1123 535 Pfam MULE transposase domain 302 396 IPR018289 -
Sto1g1123 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 168 IPR031052 GO:0006355
Sto1g1123 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 221 533 IPR031052 GO:0006355
Sto1g1123 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 102 168 - -
Sto1g1123 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 221 533 - -
Sto1g1123 535 Pfam FAR1 DNA-binding domain 136 189 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1123 Sto-Chr1 14843843 14846033 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto1g1123 MULE 2.3e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1123 - K17604 qsu:112016759 542.347