Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0998 ATGGATTCTGCTTCCTTGAAAGATTCGGTGTCTCTACCTACTGCGAGTTGCCAGTCCATGGCTATTCACCTCATCAAATCCCACGCCTCCTCGGGCGTAAAGTCTTCCACACAACCACTTGCAGTGAGAAGGGGAACGCGCGACGAAGAAGGGGAGAAGGAGAACGGAGAGGACAAGTTAACTCAAGAAGAACGCACGACGGAGAAAATTGAGAGGGCTATAGCAGTGTTGACGCTTTATTTGTGCATAGGGTTCATCACGAGGGTTTTGTGCGAGACTTCGCCTCTCTGGAGTGCTTCTCTTGTTGGTGCCGCTTTGAACTTCATTGGTTATGGTTGGGTTTGGTTGATTGTCATTGGTCGAGCTCCTGCTTTGCCTTTTCGGGCTATGAgtaattttcctttctttatatAA 414 0.471 MDSASLKDSVSLPTASCQSMAIHLIKSHASSGVKSSTQPLAVRRGTRDEEGEKENGEDKLTQEERTTEKIERAIAVLTLYLCIGFITRVLCETSPLWSASLVGAALNFIGYGWVWLIVIGRAPALPFRAMSNFPFFI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0998 137 Coils Coil 53 73 - -
Sto1g0998 137 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 82 131 - -
Sto1g0998 137 MobiDBLite consensus disorder prediction 28 65 - -
Sto1g0998 137 MobiDBLite consensus disorder prediction 28 42 - -
Sto1g0998 137 Pfam Nodulin-like 83 130 IPR010658 -
Sto1g0998 137 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 82 131 - -
Sto1g0998 137 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0998 Sto-Chr1 12392809 12396575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0998 83 135 Nodulin-like Gene Family AT5G14120 62.264 3.39e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0998 - - csin:114266976 75.485