Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0987 ATGGACAGAGAGCAAATCCCACAAATACCTAGGAGAACTACCAGATATTTAGCGTCATTGTCCAATTCAGAGAACATTCTGCACCAAGAAACTAGTCTTGACCCTCCAACAATAAATGACCTTCTAGTTGGAGGAGATCCCATTAGTTTGGATGATTTAATATCTACTTTTCCTGGTAGATGTAGCCAGATACTTGAGCTTGTGCGTCTTTTGGGACCATTGAATTTACCAATATTTCCTTTGTTTGTGTATGGAGGTGCTTCTACCGGAAAGACCAGCATCATTCTTCAGTTGTTTAGGCATCTCAATAGACCTCTTGTTTATTCTAGTTGTAGGACATGCTATAATCAGAGAATCTTGTTTGAATCGATTTTGAATCAGTTATTTCTTCATAGAAAAAATGCTGCCAATGGTTATTCAAATGCAAAGCGCTGTGAACGACCATCTGACTTTGTCAATTTTCTTCGGGAAGCATTGACCAATGTTATAAACAATCTGAAGAGGAATTCAGAGAAATTGAGATCAAGTAAGATAGCAGAAAGAGGAATTGGGAATATGATTTACTTGGTATTTGACAATTTTCAGCTTGTTAGGGAGTGGGATAAAAGTTCTACTATAATACCCTTTCTGTTTAATCTCTACGATCTGCTGAACATGCCTGAAGTGGGTATGATTTTTATCAGCAATACTTCACCTGATACCTATTACACTAATATGGGTTATGTGGAACCTGTCCCTGTGTACTTCCCTGATTACACGGAGGATGATATTCGTCAAATATTCTTGAGAAACCACACAAACCAAAAGCTGTATTCCTCGTTTCTTGATGTAGTTCTGAGGCCTTTCTGTAGAATTACTAGACAGGTGGATGAATTATATCCTGCCTTCAAGCCActatttgaaaaatattgtgAACCTTTAAGTGATCGGAGTGCTGTTCCCAGTGAAGGCATGAAGAGGGAGTTATTCAGCCATATTAGGCCTCATCTTGGCTCCTCCTTGAATGAGATACTTAAGGTTTCATCTTTTCCTTCACCTGAAGTTGAGACCCCTAAAGAGACAAAACGGAAAGGGAATTCCAAGAAATTGGAGAAACCTGAAGAAATTGTAGAGTTGGAATTTCATATGTCCAGATGTGCTAAATATCTGCTTATTTCAGCGTTTCTTGCTTCCCGAAATCCTGCAACTCTTGATGATTCACTTTTTGATTCAACTGGTGGTTCTAATAATCAAAAGCGAAAAAGGAAGCCCTCTACAAAAGTGATGGAACATAAAGAAAGTGCACAAGAGGAACTACTAATGAAAGGACCGGGAACTTTTCCATTAGAGAGGTTGTTAGCCATCTTCAAAAATATAGCAGAGGATCCATCTGATGAAGAGCAAATAATTGATGGATTGGGAATTCAAGTTGGCAATGataaacttttttttgggtcagATTGCTTAGAGAGCGTAATTGAGGCAACAAACTTCCATTTCCTTGCAATTGATCAATCTAAGCAACTCAGAGGCGAAGCCCTCTTCTCATCGAGAACTGATGAATGCGACTTACAATTAGTGGCACGCAAGCAAAACATGAGGTGCAGTGCCTGGTTAAGAGCTGGAGTAAAGTTCACTTCAATAATCTCTTCCAAGAAAAGAAAACCACCTATAGGAGACTAA 1662 0.3815 MDREQIPQIPRRTTRYLASLSNSENILHQETSLDPPTINDLLVGGDPISLDDLISTFPGRCSQILELVRLLGPLNLPIFPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTCYNQRILFESILNQLFLHRKNAANGYSNAKRCERPSDFVNFLREALTNVINNLKRNSEKLRSSKIAERGIGNMIYLVFDNFQLVREWDKSSTIIPFLFNLYDLLNMPEVGMIFISNTSPDTYYTNMGYVEPVPVYFPDYTEDDIRQIFLRNHTNQKLYSSFLDVVLRPFCRITRQVDELYPAFKPLFEKYCEPLSDRSAVPSEGMKRELFSHIRPHLGSSLNEILKVSSFPSPEVETPKETKRKGNSKKLEKPEEIVELEFHMSRCAKYLLISAFLASRNPATLDDSLFDSTGGSNNQKRKRKPSTKVMEHKESAQEELLMKGPGTFPLERLLAIFKNIAEDPSDEEQIIDGLGIQVGNDKLFFGSDCLESVIEATNFHFLAIDQSKQLRGEALFSSRTDECDLQLVARKQNMRCSAWLRAGVKFTSIISSKKRKPPIGD 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0987 553 MobiDBLite consensus disorder prediction 344 364 - -
Sto1g0987 553 Pfam AAA ATPase domain 57 212 IPR041664 -
Sto1g0987 553 MobiDBLite consensus disorder prediction 399 428 - -
Sto1g0987 553 Coils Coil 156 176 - -
Sto1g0987 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 318 IPR027417 -
Sto1g0987 553 MobiDBLite consensus disorder prediction 349 364 - -
Sto1g0987 553 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 49 532 IPR020796 GO:0000808|GO:0005634|GO:0006260
Sto1g0987 553 Gene3D - 58 236 IPR027417 -
Sto1g0987 553 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 247 460 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0987 3 532 Core DNA Replication Machinery Family AT4G29910 53.445 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0987 K02607 - gmx:100782175 698.738