Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0954 atGGTGGAGGAGACAAACAGGGAGGATGCAGTGAAAGCCATAGTGTACGAGGCAATGGCGAGGGTGAGAGATCCAGTGTATGGCAGCGCAGGAGCTATTGTGCAGCTGCAGAAGATGGTTCGAGAGCTCAAGGTGGAACTAGAAACAATGAAAGCTAGGGTTTCACAATTTAAAGAACAAAGAGGCCAATTGTTGAAGAATTTTCATACCAATTCTTCTACatctcttcatcatcatcttcttcttcatccacTTGGTGAACCTCTTTTTGATGAATTCTACAATACTTTGTTAATAGATCCACTTGAGTTTCCTGTACCAGGCAATTGTGTCTCGGCAGACGTGGAAGAGGAAATAGAGCATACTAAGATTGTTGCAGTTGAGGATCTGTCAATTGAAAGCTCTAAACCTTGA 414 0.3961 MVEETNREDAVKAIVYEAMARVRDPVYGSAGAIVQLQKMVRELKVELETMKARVSQFKEQRGQLLKNFHTNSSTSLHHHLLLHPLGEPLFDEFYNTLLIDPLEFPVPGNCVSADVEEEIEHTKIVAVEDLSIESSKP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0954 137 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 74 - -
Sto1g0954 137 Coils Coil 33 67 - -
Sto1g0954 137 Pfam Lateral organ boundaries (LOB) domain 2 51 IPR004883 -
Sto1g0954 137 ProSiteProfiles LOB domain profile. 1 54 IPR004883 -
Sto1g0954 137 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0954 Sto-Chr1 11757303 11759237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0954 4 66 AS2 family AT1G07900 49.206 1.32e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto1g0954 LOB 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0954 - - qsu:112035510 100.138