Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0910 atgggttttggagTGAGGAAGTCATACACAAACAAGAGCAAAAAAGATGGCTCTATCATGACGGTTCGATTCGTTTGTAACAAGGAAGGGTTGAGAGGGAAAGATAAAAGAGATCATCTTACTAAGAATCCCCGGCGAGAAACAAGAACGGATTGTAAGGTTAGAATGGGACTCACACATGTGGATGGAATATTTAGAATCTATGACTTCATAGAGGATCATAATCATGTTCTTCAAACTCCAAAAACAACTCATATGTTGGCCTCTCAACGAAAGATATCAAAAGTTCAAGCACTTGAGATTGAGTTGGCTGAAGATTCCGGGTTACAACTAAGAACATCATATGAGTTGTCCAGCAGACATGCGGGCGGAAAAGATAATCTTGGCTACACTCGTTTAGATCAGAAAAACTATCTCCGAACTATAAGAAAAAGGAGTTTGATGTATGGGGAAGCTGGTTGGTTGCTAAGATATTTCAAAAAGCAGAACTTGAAAAATCCATCATATTACCATGATTATCAAATGGATAGTGAAGaacaaataactaatatattttgGGCTGATCCTAAAATGCTTTTGGACTACAGTTATTTTGGTGACGTGGTTTCTTTGGACACAACATATTGTATTAACAATGCACATAGGTCACTTGCtatattttcaggatttaatcaTTTTAGGGGGGTGGTGATTTTTGGAGCTGCTTTACTATATGATGAGACGGCGTCATCCTTTAAGTGGTTGTTTAAAACATTTTTGGAAGCAAATTTGCAGAAAAAGCCTCAGACCATATTCATTGACCAAGATCATGCAATGGCTAAAGCATTACACGAGGTTATGCCTGAGGTTTGCCATGGATTATGCACTTGGCATTTTATGCAAAATGGCATCAAGCACTTGGGCAACTTGATGAAGAATGGATCTCACTTTTTAAAAGACTTTAAAACCTGTATGTTTGGATATGATGAGGAGGCACAATTTGAGGTTGCTTGGAGTAGGAGGAATGAGATTCAACCTCACTTTGAATATGTTATTAATATGCTTGATCAAGAGGGTAAATTTAGAGTTTTGTTTGATTCTCTTCAGAAGGAAGTGTTTTGTAGTTGTAGGAGGTTCGAGCACTTCGGTATTTTGTGTTGCCATGCTTTGAAGGTGCTTGAAGTGAATGGAGTTATGACTATTCCTGATCAGTACATTTTGAAGAGATTGACTAAAGATGCTCGAAGTGGTGCTATAGAGGATGTTAATGGAAACAAAGTTGTGGAAGATCCTGATTCAATTGGCACGATGCGACATAGACAACTTTGGCCCAAGCTAGTTAAATTAGCATCAGACGTGAGTAATTCTGAACAAGCGTTCTTATTGGTAAATAAAGTTGTGGATGAATTGTGTAAGCAAGTCTCGGAGATTTTGTTGGAAACAATAGATGTGAACAATGAGATAGATGATCCTATAGCACCAATTAGTGAATGCTTGTCACAACCAACAGGAATTAAGAAACGGCCTGGCACTAAAAGGAAGGGTCGTTACAAGTCTTGTCTTGATAGGAAAAAGAAGTCAAGTGCCAAAAATTCCCAAAGTCAAAGATCAATAGACAATGAAGCTGTAAATCAAGTGAACTTTGAGGTGCCTAAAATCTATGGGAATCAAGTGAACTTTGAGACGCCTCAAGGATCTAGCAATCAAATGAACTTTGAGGTGCCTCCAAATTTGGGGACTCAATTTAGTTTCACCAAGTTTTTGATGgaGCCATTCTCTACACAGTCACTTGAAGGATCAGAGTTCTATGGTGATTTTTCAAATGCCAATGACCAAAGCTAG 1821 0.3734 MGFGVRKSYTNKSKKDGSIMTVRFVCNKEGLRGKDKRDHLTKNPRRETRTDCKVRMGLTHVDGIFRIYDFIEDHNHVLQTPKTTHMLASQRKISKVQALEIELAEDSGLQLRTSYELSSRHAGGKDNLGYTRLDQKNYLRTIRKRSLMYGEAGWLLRYFKKQNLKNPSYYHDYQMDSEEQITNIFWADPKMLLDYSYFGDVVSLDTTYCINNAHRSLAIFSGFNHFRGVVIFGAALLYDETASSFKWLFKTFLEANLQKKPQTIFIDQDHAMAKALHEVMPEVCHGLCTWHFMQNGIKHLGNLMKNGSHFLKDFKTCMFGYDEEAQFEVAWSRRNEIQPHFEYVINMLDQEGKFRVLFDSLQKEVFCSCRRFEHFGILCCHALKVLEVNGVMTIPDQYILKRLTKDARSGAIEDVNGNKVVEDPDSIGTMRHRQLWPKLVKLASDVSNSEQAFLLVNKVVDELCKQVSEILLETIDVNNEIDDPIAPISECLSQPTGIKKRPGTKRKGRYKSCLDRKKKSSAKNSQSQRSIDNEAVNQVNFEVPKIYGNQVNFETPQGSSNQMNFEVPPNLGTQFSFTKFLMEPFSTQSLEGSEFYGDFSNANDQS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0910 606 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 338 474 - -
Sto1g0910 606 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 2 332 - -
Sto1g0910 606 MobiDBLite consensus disorder prediction 493 534 - -
Sto1g0910 606 Pfam MULE transposase domain 201 295 IPR018289 -
Sto1g0910 606 Pfam SWIM zinc finger 362 387 IPR007527 GO:0008270
Sto1g0910 606 MobiDBLite consensus disorder prediction 500 514 - -
Sto1g0910 606 Pfam FAR1 DNA-binding domain 1 79 IPR004330 -
Sto1g0910 606 ProSiteProfiles Zinc finger SWIM-type profile. 354 390 IPR007527 GO:0008270
Sto1g0910 606 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 332 IPR031052 GO:0006355
Sto1g0910 606 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 338 474 IPR031052 GO:0006355
Sto1g0910 606 SMART 26again6 365 392 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0910 Sto-Chr1 10004381 10006762 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto1g0910 MULE 3.4e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0910 - - ahf:112709060 445.662