Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0891 ATGGGAAGAGCTCCATGTTGCTCCAAAGTTGGGCTACACAGAGGCCCATGGACTCCCAAAGAAGACGCATTGCTCACAAAGTGTGGAAAAAGTTGTAGACTTCGATGGATGAACTATCTGAGACCGGACATCAAAAGAGGAAACATAACTCCCGAAGAAGACGACCTCATCATCCGAATGCATTCCCTTTTGGGAAACCGATGGTCTCTGATCGCCGGAAGGTTACCGGGAAGAACGGATAACGAAATCAAGAACCACTGGAACACCCATCTCAGCAAGAGGCTCCGGAACCAAGGAACCGACCCGGATACCCACGGAAAGATATCGTCATTACTACCcgtgaaagaaaacaaaaagaagacaaagaagaacaagaacaagaagaggaagaagaacgatgagaagaaagaagtagaagaagaagaagaaatagaagagaaaaagacGGTTGTGTATCTGCCCAAACCCATAAGAGTCACAGCCATAttgacttcttcttcttcttcgctaTTGGATTATTCAAACTCGTCGGCTGCTAGTGGATCTACGAGGGAGGAGTTATCAGAAAAGGGCCTAAATATTTGgggagaaaataataattacattaataacaataataataataataatgatgggTTTGTTGGGTTTCTTGAGGAAGACGAGAATGATGATGAAATATTGGTGAAGAGTTCAGAGATGGAAGGACAGTCGTCGGAGTTTCCAACGTCGATGGAAGAACATCATGGGACGTCGCTGGAGAAGCTGTACGAGGAATATTTGCAGCTCTTGAATAACCAAGATCATCCGTACACTCCCACTAATGATGATGAAGGTTATGATAATCATGATCAAGATTTGGAGTCTTTTGCTGAATCTTTATTggtttga 888 0.3592 MGRAPCCSKVGLHRGPWTPKEDALLTKCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNHWNTHLSKRLRNQGTDPDTHGKISSLLPVKENKKKTKKNKNKKRKKNDEKKEVEEEEEIEEKKTVVYLPKPIRVTAILTSSSSSLLDYSNSSAASGSTREELSEKGLNIWGENNNYINNNNNNNNDGFVGFLEEDENDDEILVKSSEMEGQSSEFPTSMEEHHGTSLEKLYEEYLQLLNNQDHPYTPTNDDEGYDNHDQDLESFAESLLV 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0891 295 MobiDBLite consensus disorder prediction 263 295 - -
Sto1g0891 295 Gene3D - 24 45 - -
Sto1g0891 295 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 267 - -
Sto1g0891 295 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 27 - -
Sto1g0891 295 Coils Coil 117 148 - -
Sto1g0891 295 MobiDBLite consensus disorder prediction 131 145 - -
Sto1g0891 295 Pfam Myb-like DNA-binding domain 46 91 IPR001005 -
Sto1g0891 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 95 IPR017930 -
Sto1g0891 295 ProSiteProfiles Myb-like domain profile. 41 91 IPR001005 -
Sto1g0891 295 MobiDBLite consensus disorder prediction 93 145 - -
Sto1g0891 295 SUPERFAMILY Homeodomain-like 26 101 IPR009057 -
Sto1g0891 295 Gene3D - 50 95 - -
Sto1g0891 295 MobiDBLite consensus disorder prediction 273 287 - -
Sto1g0891 295 PANTHER MYB TRANSCRIPTION FACTOR 27 267 - -
Sto1g0891 295 PANTHER MYB TRANSCRIPTION FACTOR 1 27 - -
Sto1g0891 295 CDD SANT 50 91 IPR001005 -
Sto1g0891 295 SMART sant 45 93 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0891 Sto-Chr1 9769033 9770103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0891 4 105 MYB Transcription Factor Family AT3G13540 60.163 9.16e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto1g0891 Myb_DNA-binding 7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0891 K09422 - zju:107423630 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0891 1 9769033 9770103 Sto1g0891 1 9769033 9770103 ECH