Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0875 ATGAATTTTAACGTTGTCAAGAATGGACAGAGGACAAGGGAGCTTCCCGAGTTCCAAGATGATTTCGTAGAGAGAGATCCTACTGGCCGTTATCTTCGGTACAATGAAATCTTGGGCAGGGGTGCATTCAAGACCGTTTATAGGGGATTTGATGAAGTTGATGGGATTGAAGTTGCTtggaaccaaattaaaattgatgatATCTTGCGGTCAGCAGAAGATAAATCAAAATTGTATTCGGAAGTTCACCTTTTGAAGTCTTTAAAACATGAAAATATCATTAAGTTTTATAATTCATGGATTGATGATAAGGAGAAAACTATTAACATGATTACTGAGCTCTTCACATCAGGAAATTTGAGGCAGTACCGTAAGAAGCATAAATATGTTGACATAAAGGCTATAAAGAATTGGGCCAGGCAGATTCTTCGAGGCTTAGTGTATCTACATGGTCACAAGCCACCAATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGAGAAGCTAAGATAGGAGACCTTGGCTTGGCAATTGTCATGAAACGGCCAACTGCTCAAAGTGTCATTGGTACTCCTGAGTTTATGGCTCCTGAGCTATATGAAGAGGAGTACAATGAACTTGTCGACGTATATTCTTTTGGGATGTGCATATTAGAGATGGTTACATTAGAGTATCCCTATTCTGAATGCAAAAATTCAGCTCAGATCTTTAAGAAAGTTTCCTCTGGCATCAAGCCTGCTTCTCTTGGTAAAGTGGAGGACTCTCAAATTAAGGAGTTTATTGAGAAATGTATTGTTCCAGTCTCTGAGAGATTGTCTGCAGAGGAGCTTCTTAAAGATCCATTTCTACAATTACCTAAGCAAACTTCAAAAGCCATGGATACATCCAAGTCTGGTCCTTTATATATGGATATAGATGATGAATACAAAAACATTGACTGGATTATAAACGGTGAAAGGTACATTGGAAGTCCACCTATTTCAGTTCTAGAACTCCAAAGGACAAATAAGGACAATGAATTTAGGTTAGAAGGGTCCATACAGGATGATACTTCAGTATCATTGACCTTGCGTATTGCTGATGCACATGGTCGGGTAAGGAAAATAGATTTCCTATTTTACCTTTATACAGATACTGCAATCTCTGTAGCCTCAGAGTTGGCTGAAGAACAGGAGTTGGCAGATCATGATGTGGCCTTCATTGCTGAGATGATTGATTACTTGATGTTGAGACTTCTGCCTGGGTGGAAGCCCTTTGGAAAGGCTACTGAGAAAAAAGTTTTGCGTAGCAATGCTGATAATGCCGATTTTCAGGCTTTCTATTCTACTTCTCCTAGTTTGACTGGCTTGGAAGATCTATATTCACTAGAGGGATCATCTTCAACTTCTGAAAAGAGGTTTCTTGATGTCAATTTTGATGGGATCTCAGAGGTGGAGCTAGGGGATACATATTTTGAGGACTGTAAGTTGCAGGCAGTAGGTAGTAACAGCGATTCTGAAGAAAGCACTGTGATCAATGAATTCACAAGGAACTCATCTGAGTCAGCAACCCTAGATTTTGGTGCAATAGCATCTAATCTTATGAGCGTAAGAAGCTCTTGTTCTTCTCTGTCCTTAGAAGAGAAAGACAATGATGTTGAGCTAAAGTTGGAACTAGATGCAATTGAGTCGCAGTATCAGCATTGGTTTAAAGAACTTTCTAGAATGAAATTGGAAGCATTGGAAGCCAGCAGAAAGAGATGGACTGCCAAGAAAAAACCATCTGTTCATTGA 1791 0.3892 MNFNVVKNGQRTRELPEFQDDFVERDPTGRYLRYNEILGRGAFKTVYRGFDEVDGIEVAWNQIKIDDILRSAEDKSKLYSEVHLLKSLKHENIIKFYNSWIDDKEKTINMITELFTSGNLRQYRKKHKYVDIKAIKNWARQILRGLVYLHGHKPPIIHRDLKCDNIFVNGNQGEAKIGDLGLAIVMKRPTAQSVIGTPEFMAPELYEEEYNELVDVYSFGMCILEMVTLEYPYSECKNSAQIFKKVSSGIKPASLGKVEDSQIKEFIEKCIVPVSERLSAEELLKDPFLQLPKQTSKAMDTSKSGPLYMDIDDEYKNIDWIINGERYIGSPPISVLELQRTNKDNEFRLEGSIQDDTSVSLTLRIADAHGRVRKIDFLFYLYTDTAISVASELAEEQELADHDVAFIAEMIDYLMLRLLPGWKPFGKATEKKVLRSNADNADFQAFYSTSPSLTGLEDLYSLEGSSSTSEKRFLDVNFDGISEVELGDTYFEDCKLQAVGSNSDSEESTVINEFTRNSSESATLDFGAIASNLMSVRSSCSSLSLEEKDNDVELKLELDAIESQYQHWFKELSRMKLEALEASRKRWTAKKKPSVH 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0875 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Sto1g0875 596 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 359 412 IPR024678 GO:0004674|GO:0005524
Sto1g0875 596 Gene3D Transferase(Phosphotransferase) domain 1 115 294 - -
Sto1g0875 596 PANTHER KINASE DOMAIN PROTEIN 431 596 - -
Sto1g0875 596 PANTHER KINASE DOMAIN PROTEIN 9 431 - -
Sto1g0875 596 Gene3D Phosphorylase Kinase; domain 1 16 113 - -
Sto1g0875 596 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 431 596 - -
Sto1g0875 596 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 431 - -
Sto1g0875 596 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0875 596 CDD STKc_WNK 30 289 - -
Sto1g0875 596 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0875 596 SMART serkin_6 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0875 596 Gene3D - 357 438 - -
Sto1g0875 596 SUPERFAMILY Protein kinase-like (PK-like) 27 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0875 Sto-Chr1 9461776 9466896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0875 21 596 MAP Kinase Kinase Kinase AT5G41990 48.475 1.11e-175 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto1g0875 Pkinase 3.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0875 K08867 - jre:108986606 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0875 1 9461776 9466896 Sto1g0875 1 9461776 9466896 ECH