Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0819 ATGATGGTGGGAAATGGAGAGAAAAGCTTTAAATCTAATGAAATCCCCATTCTTACATACCATCATGATGATGACCAACAGAGAAAGGCAGTAATAACCAAAGATATTCCAAAGGGGTGTTTGGCAATCAAGGTAGGTTCTACTCTAGGTGGTGGAGATCAAGAGAGAATTGTGGTGCCTGTGAATTATTTGAACCACCCACTTTTTGCTCAGCTTTTAAAGGAGGCAGAGGAAGAGTATGGGTTTGCTCAAGAGGGAGCCATAGTTATCCCATGTCAATTGGATCATTTTAGGGTTTGA 300 0.41 MMVGNGEKSFKSNEIPILTYHHDDDQQRKAVITKDIPKGCLAIKVGSTLGGGDQERIVVPVNYLNHPLFAQLLKEAEEEYGFAQEGAIVIPCQLDHFRV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0819 99 Pfam Auxin responsive protein 30 98 IPR003676 GO:0009733
Sto1g0819 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 98 IPR003676 GO:0009733
Sto1g0819 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 22 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0819 Sto-Chr1 8611781 8612203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0819 35 98 Calmodulin-binding Proteins AT3G43120 48.438 8.67e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0819 K14488 - pop:7497282 107.457