Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0811 ATGGGTAGTAAAGAGAAGAGTAGTGTGAAGAAGAGGAATTGCAGAGACGTGCCTAAGGGGTGTTTGGCGATCAAGGTGGGTCAAGGAGGCGAAGAGGAATTGCAGAGATTCGTCGTGCCTGTGATTTACTTCAATCATCCTCTGTTCTTGCAGCTTCTGAAGGAGGCAGAGGAAGAATATGGGTTTGATCAGAAAGGAACCATCACCATCCCTTGCCACGTGGAGGAGTTTCGGAACCGTGATGGGAAGTAA 252 0.4841 MGSKEKSSVKKRNCRDVPKGCLAIKVGQGGEEELQRFVVPVIYFNHPLFLQLLKEAEEEYGFDQKGTITIPCHVEEFRNRDGK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0811 83 PANTHER SMALL AUXIN-UP RNA-RELATED 11 82 - -
Sto1g0811 83 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 82 IPR003676 GO:0009733
Sto1g0811 83 Pfam Auxin responsive protein 11 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0811 Sto-Chr1 8492248 8492972 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0811 3 78 Calmodulin-binding Proteins AT5G20810 50.000 6.82e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0811 - K14488 dzi:111287555 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0811 1 8492248 8492972 Sto1g0811 1 8492248 8492972 ECH
Sto6g1202 6 11483318 11483587 Sto1g0811 1 8492248 8492972 ECH