Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0773 atggggaagaagaagcaaggagGAGGAACTTCATGGTTGACCGCAGTCAAAAGAGCCTTCAGATCTCCCACCAAAGAAGAACCCCAAGAAAAGAGGGAAAAACGAAGATGGATCTTCAGAAAACCAGCCATAAGCAATGAAACACCGAAGCAGGACTCCGATGCGGTCGCGGCGGCGGCGGATCAAAACCACGCGCTGGCGGTGGCGGTTGCGGTGGCCGCCGCCGAGGCCGCTCGGGCCACCGCTCAGGCGGCCGTGGAAGCGGCGAGGCTTACGCGGCGACATCGAACCAAAGACCACAATTCTGCCGCTATTGTAATCCAAACCGCGTTCAGAGGATATCTAGCAAGAAGGGCACTTAGAGCACTGAAGGGGTTGGTGAAGCTTCAGGCATTAGTGAGAGGTCACAATGTGAGGAAGCAAGCAAAGATGACACTTCGGTGCATGCAGGCTCTGGTTCGAGTCCAAGCGCGCGTGGTTGACCAGCGCGTGAGGTTGTCACACGATGGAAGCAGTAGAAAATCCATCGCCACGCTCAGTGACACCAATAGCCTCTTGGAATCTCGGTATCTTCAGGACATTTCCGATAGGAGATCCATTTCGAGAGAAGGAAGCAGCGTAGCAGACGATTGGGATGAAAGGCCACACACagttgaagaaattaaagctATGTTGAAGCATAGGAAGGAAGCTGCAGCTATGAAGCGAGACAAGTCCTTGTCTCAAGCTTTTTCTCAACAGgtGTGGAGGgcaggaggaagaaggggatcGATTGGGAGTGAAGAGGAGGTGGAGGAGAGACCGATATGGATGGATCGGTGGATGGCGGCGCCGGGGAAGCCATGGGAGGCTAGGAGGAGAGCTTCAACTGATCAAAGAGATGCCATTAAAACAGTAGAAATGGATACTTCTCAGCCATACTCTCATTTAGGATCTAATTACAGAAAATCacatcctaattatcaatacaaccctcatcatcatcatcaccatcaccaaCCTCAAAGGCACTCAGTGGCTTCCCCAATCCACAGGACCCAGTATTCCCCTGCTACACCTTCTCCGGCGAGGTCAAGGCCGGTCCAAGTCCGGTCGGCCAGCCCTCGATGTGGAAGAGAAGATAGAAGCTTCCATACTTCCCAAACACCAAGCTTGAGGTCTAATTATCATTACACAGGAAACTTGTCCCAATATAGAAGGACTGGAACAAGTAATTATAGTGATAGTGGTGGTGGCAACGGTGGTGGTGGTAATTCTTTGCCTAATTACATGGCGGCAACCGAGTCCGCAAAGGCTCGGATTCGCTCCCAGAGCGCGCCGAGGCAGAGGCCTTCGACTTCTGAGCGGGATAGAGTTGGGTCAGCCAGGAAGAGGCTTTCCTTCCCTGCTCCTCCTCCATCAGATGGTTATGGTTATGGCAGTTATGGAAGTTGTTATGGACATAGTTTGAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACAATTTGGGTTGGATTTGCAGTCTAACTATTCTTCTTGTTGCTCTGAGAGCCTTGGtggttgtggtggtggtggtgggatgTCTCCTTCTTCAACTAGTGACCTTAGAAGATGGCTAAGATGA 1605 0.4741 MGKKKQGGGTSWLTAVKRAFRSPTKEEPQEKREKRRWIFRKPAISNETPKQDSDAVAAAADQNHALAVAVAVAAAEAARATAQAAVEAARLTRRHRTKDHNSAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVVDQRVRLSHDGSSRKSIATLSDTNSLLESRYLQDISDRRSISREGSSVADDWDERPHTVEEIKAMLKHRKEAAAMKRDKSLSQAFSQQVWRAGGRRGSIGSEEEVEERPIWMDRWMAAPGKPWEARRRASTDQRDAIKTVEMDTSQPYSHLGSNYRKSHPNYQYNPHHHHHHHQPQRHSVASPIHRTQYSPATPSPARSRPVQVRSASPRCGREDRSFHTSQTPSLRSNYHYTGNLSQYRRTGTSNYSDSGGGNGGGGNSLPNYMAATESAKARIRSQSAPRQRPSTSERDRVGSARKRLSFPAPPPSDGYGYGSYGSCYGHSLRSPSFKSVSGSQFGLDLQSNYSSCCSESLGGCGGGGGMSPSSTSDLRRWLR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0773 534 SMART iq_5 122 143 IPR000048 GO:0005515
Sto1g0773 534 SMART iq_5 99 121 IPR000048 GO:0005515
Sto1g0773 534 MobiDBLite consensus disorder prediction 515 534 - -
Sto1g0773 534 MobiDBLite consensus disorder prediction 339 361 - -
Sto1g0773 534 MobiDBLite consensus disorder prediction 20 41 - -
Sto1g0773 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 144 IPR027417 -
Sto1g0773 534 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Sto1g0773 534 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Sto1g0773 534 Pfam Protein of unknown function (DUF4005) 367 473 IPR025064 -
Sto1g0773 534 MobiDBLite consensus disorder prediction 281 466 - -
Sto1g0773 534 Gene3D - 98 153 - -
Sto1g0773 534 MobiDBLite consensus disorder prediction 1 55 - -
Sto1g0773 534 MobiDBLite consensus disorder prediction 321 338 - -
Sto1g0773 534 MobiDBLite consensus disorder prediction 377 443 - -
Sto1g0773 534 MobiDBLite consensus disorder prediction 284 298 - -
Sto1g0773 534 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Sto1g0773 534 MobiDBLite consensus disorder prediction 299 320 - -
Sto1g0773 534 PANTHER IQ-DOMAIN 5-RELATED 8 534 - -
Sto1g0773 534 MobiDBLite consensus disorder prediction 520 534 - -
Sto1g0773 534 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 8 534 - -
Sto1g0773 534 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0773 Sto-Chr1 7918179 7920213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0773 12 534 IQD Protein Family AT4G00820 54.417 4.38e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0773 - - gmx:100786729 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0773 1 7918179 7920213 Sto5g1343 5 9186991 9201592 ECH
Sto1g0773 1 7918179 7920213 Sto1g0773 1 7918179 7920213 ECH
Sto6g1211 6 11596963 11599102 Sto1g0773 1 7918179 7920213 ECH