Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0769 ATGAGTATTTCAGTGAATGGACAATCTCAAGTGCCTCCTGGCTTCAGGTTCCATCCCACAGAAGAGGAGCTTCTTATGTACTACCTCAGGAAGAAGGTCTCCTACGAGAAGATCGATCTCGACGTCATTCGTGACGTCGATCTCAACAAGCTCGAGCCGTGGGACATTCAAGAGAAGTGCAAGATAGGAAGCACACCCCAGAATGACTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCGACCGGCACACGAACCAACCGCGCCACGGCCGCGGGCTTCTGGAAGGCCACGGGCCGCGACAAGATGTCAAATGTGATGATGGGAGGAGACGGAGCTCAGGGGGAAGAAGGATGGGTGGTGTGTAGAATATTCAAGAAGAAGAACCATTTGAAAACCCTGGATTGCCCCTTATCTTCGTCCATTATTACCGGAGATACCACCCGGCCGAGAAGCCGGGTCTTCGATGGAAGCAGCAGCGGCATCATTGATCACGACCGTTCATCAGATGGAGCCATCCAACGGTGGTGGGCTTGCCAACTGGGCGGCTCTGGATCGGCTCGTGGCTTCGCAGCTCAATGGTCACCAGACTGA 594 0.5354 MSISVNGQSQVPPGFRFHPTEEELLMYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKMSNVMMGGDGAQGEEGWVVCRIFKKKNHLKTLDCPLSSSIITGDTTRPRSRVFDGSSSGIIDHDRSSDGAIQRWWACQLGGSGSARGFAAQWSPD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0769 197 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Sto1g0769 197 SUPERFAMILY NAC domain 7 127 IPR036093 GO:0003677|GO:0006355
Sto1g0769 197 Gene3D NAC domain 20 112 IPR036093 GO:0003677|GO:0006355
Sto1g0769 197 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 111 149 - -
Sto1g0769 197 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 6 103 - -
Sto1g0769 197 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 103 - -
Sto1g0769 197 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 111 149 - -
Sto1g0769 197 Pfam No apical meristem (NAM) protein 12 104 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0769 Sto-Chr1 7829466 7830724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0769 1 166 NAC Transcription Factor Family AT2G46770 57.209 1.21e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto1g0769 NAM 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0769 - - ahf:112734309 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0769 1 7829466 7830724 Sto1g0769 1 7829466 7830724 ECH