Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0757 ATGTCTCAATACAACGTTAACGACACAACATTGACAAAAATCTTCGTGGGAGGGCTTGCTTGGGAGACGCAAAGGGACACAATGAGAAGGTATTTTGAAGAGTTCGGAGAGATTGTTGAAGCTGTGGTTATCACAGACAAGAACACAGGGAGATCCAAGGGTTATGGCTTTgTAACATTTAAGGATGCTGAGGCAGCCATGCGAGCATGTCAGAATCCTTCTCCGGTTATTGATGGCAGAAGAGCAAATTGCAATCTTGCTTCTCTTGGTGCAAACAATAAGAATCCACCTCCTCTACCTCTACTTGGTGCAGGAGGGAGATTCAGAGCATCATCACCAGCATATCATGCCTCTTCCTCCAGTACTATTTTCCGTCAACCTTCTGGCCAAAACACATTTCCATATTCACCTTACGGGTAA 420 0.4452 MSQYNVNDTTLTKIFVGGLAWETQRDTMRRYFEEFGEIVEAVVITDKNTGRSKGYGFVTFKDAEAAMRACQNPSPVIDGRRANCNLASLGANNKNPPPLPLLGAGGRFRASSPAYHASSSSTIFRQPSGQNTFPYSPYG 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0757 139 MobiDBLite consensus disorder prediction 119 139 - -
Sto1g0757 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 71 IPR000504 GO:0003723
Sto1g0757 139 PANTHER - 5 139 - -
Sto1g0757 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 89 IPR000504 GO:0003723
Sto1g0757 139 PANTHER BOULE-RELATED 5 139 IPR037366 GO:0003729
Sto1g0757 139 Gene3D - 4 95 IPR012677 -
Sto1g0757 139 SUPERFAMILY RNA-binding domain, RBD 5 88 IPR035979 GO:0003676
Sto1g0757 139 SMART rrm1_1 13 85 IPR000504 GO:0003723
Sto1g0757 139 CDD RRM_RBM24_RBM38_like 12 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0757 Sto-Chr1 7680931 7681681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0757 8 88 C2H2 Transcription Factor Family AT2G19380 44.444 2.19e-17 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0757 1 7680931 7681681 Sto1g0757 1 7680931 7681681 ECH