Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0752 ATGCAGTTGGTGATGTCGAGTGTGATCCCAATGGCGTTGCAAACGACAATCGAGCTGGGCGTTTTCGAAATCATAGCCAAAGCCGGTGAAAGCGCCAAGTTCTCTGCAAACGACATTGCGGATCAGCTTCCAACGAAGAACCCAGAGACGCCCAAAATGCTGGATCGCCTCCTTGGGCTGCTCGCTACGCACTCTATTCTTCATTGCTATAATTcttcagaagaagaagaagaagaaaaagaaagagttgTGTCCCAAAGGCTCTATAGCCTCACTCCGGTGTCCAAGTTTTTCGCTCATGACGCTGATGGTATGTCGCTGGCTCCCATCTTGATTCTGACTCAGCACAAATCCTTCTTGGAAAGCTGGATTCatttaaaagatgcaattttgaAAGGAGGAACAGCTTTTGAACTGACTCATGGAGTGAGGCAATTTGAATACCTTGGGAAAGACTCGGAATTCAATGAGTTGTACAACACAGCATTGACTCAACACACTTGCATAGTTATGAAGAAAATTCTTGAATCCTACAAAGGCTTTGAGAATCTCAACACACTTGTGGATGTTGGTGGTGGCCTAGGCTTCAGCCTCAGCATGATCACTTCCAAATATCCTCATATTAAGGCAATCAATCTTGACCTGCCCCATGTCATCCAACAAGCCCCTCCTTATCCTGGGGTGGAACACATGGCTGGTGATATGTTTGAAAGTGTACCCAAGGCAGATGTCATTTTTATGAAGTGGATTCTCTGTTCTTGGAGTGATGAGAAATGCGTGAAACTATTGAAGAACTGCTATGCGGCGACTCCTGAAAATGGGAAGGTGATAGCAGTTGAATTAGGCATACCGGATATTCCTGACACCAATGCTGCTACGAAGTGTAACTTTGAGCTTGATGTTTTTATGATGGTTCGATATTCGGGTGGCAAAGAGCGAAATCAACATGAATTCATGCAACTCGCAAATGCTGCTGGATTTATGGGTGTTAAATATAAATGTCGTACTCGTAATTTCTGGGTTATTGAGTTTTTCAAGTAA 1041 0.4217 MQLVMSSVIPMALQTTIELGVFEIIAKAGESAKFSANDIADQLPTKNPETPKMLDRLLGLLATHSILHCYNSSEEEEEEKERVVSQRLYSLTPVSKFFAHDADGMSLAPILILTQHKSFLESWIHLKDAILKGGTAFELTHGVRQFEYLGKDSEFNELYNTALTQHTCIVMKKILESYKGFENLNTLVDVGGGLGFSLSMITSKYPHIKAINLDLPHVIQQAPPYPGVEHMAGDMFESVPKADVIFMKWILCSWSDEKCVKLLKNCYAATPENGKVIAVELGIPDIPDTNAATKCNFELDVFMMVRYSGGKERNQHEFMQLANAAGFMGVKYKCRTRNFWVIEFFK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0752 346 SUPERFAMILY "Winged helix" DNA-binding domain 1 101 IPR036390 -
Sto1g0752 346 Pfam Dimerisation domain 11 62 IPR012967 GO:0046983
Sto1g0752 346 Pfam O-methyltransferase domain 123 327 IPR001077 GO:0008171
Sto1g0752 346 Gene3D - 1 98 IPR036388 -
Sto1g0752 346 PANTHER O-METHYLTRANSFERASE 1 346 IPR016461 GO:0008168
Sto1g0752 346 Gene3D Vaccinia Virus protein VP39 99 346 IPR029063 -
Sto1g0752 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 103 344 IPR029063 -
Sto1g0752 346 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 346 IPR016461 GO:0008168
Sto1g0752 346 PIRSF O-mtase 1 346 IPR016461 GO:0008168
Sto1g0752 346 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0752 Sto-Chr1 7629242 7633690 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0752 1 346 Monolignol Biosynthesis Gene Families AT5G54160 50.578 9.18e-127 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0752 K13066 - zju:107423771 419.853