Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto1g0750 | ATGCAGTTGGTGATGTCGAGTGTGATCCCAATGGCGTTGCAAACGACATTGGAGCTGGGCGTTTTCGACATCATAGCGAAAGCCGGTGAAGGCGCCAAGCTCTCTGCAAACGACATTGCGGATCAGCTTCCAACGAAGAACCCAGAGACTCCCAAAATGCTGGATCGCCTCCTTGGGCTGCTCGCTACGCACTCTATTCTTCATTGTTAA | 210 | 0.519 | MQLVMSSVIPMALQTTLELGVFDIIAKAGEGAKLSANDIADQLPTKNPETPKMLDRLLGLLATHSILHC | 69 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto1g0750 | 69 | Gene3D | - | 1 | 69 | IPR036388 | - | |
| Sto1g0750 | 69 | PANTHER | O-METHYLTRANSFERASE | 1 | 68 | IPR016461 | GO:0008168 | |
| Sto1g0750 | 69 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 69 | IPR016461 | GO:0008168 | |
| Sto1g0750 | 69 | PANTHER | CAFFEIC ACID O-METHYLTRANSFERASE | 1 | 68 | - | - | |
| Sto1g0750 | 69 | SUPERFAMILY | "Winged helix" DNA-binding domain | 1 | 69 | IPR036390 | - | |
| Sto1g0750 | 69 | Pfam | Dimerisation domain | 11 | 62 | IPR012967 | GO:0046983 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto1g0750 | Sto-Chr1 | 7599328 | 7599537 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto1g0750 | 1 | 69 | Monolignol Biosynthesis Gene Families | AT5G54160 | 53.623 | 5.20e-18 | 73.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto1g0750 | K13066 | - | zju:107423771 | 97.8265 |