Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0748 ATGCAGTTGGTGATGTCGAGTGTGATCCCAATGGCGTTGCAAACGACATTCGAGCTCGGCGTTTTCGACATCATAGCCAAAGCCGGTGAAGGCGCCAAGCTGTCTGCAAACGACATTGCGGATCAGCTTCCAACGAAGAACCCAGAGACGCCCAAAATGCTGGATCGCCTCCTTGGGCTGCTCGCTACGCACTCTATTCTTCATTGCTCTAATTcttcagaagaagaagaaaaagaaagagttgTGTCCCAAAGGCTCTATAGCCTCACTCCGGTGTCCAAGTTTTTCGCTCATGATGCTGATGGTATGTCGCTGGCTCCCATCATGGTTGTGGTTCAGCACAAGTCCTTCTTGGAAAGCTGGGTTCatctgaaagatgcaattttaaAAGGAGGAAGAGCTTTTGAAATGACTCACGGAGTGAATCCGATCGAATACCTTGAGAAAGACTCAGAATTCAACAAGTATTTCAACACAGCATTGACCCAACACACTTGCATAGTTATGAAGAAAATTCTTGAATCCTACAATGGCTTTGAGAATATCAACACACTTGTGGATGTTGGTGGTGGCCTAGGCCTCAACCTCAGCATGATCACTTCCAAATATCCTCATATTAAGGCTATCAATCTTGACTTGCCCCATGTCATCCAACAAGCCCCTCCTTATCCTGGGGTGGAACACGTGGCTGGTGACATGTTTGAAAGTTGGATTCTTCATGACTGGAGTGATGAGAAGTGCCTGAAATTATTAAAGAACTGCTGTGCTGCGATTCTTGAAAATGGGAAGGTGATTGCAGTTGAATCAGGCATAACGGATGTGCCTCACACCACTACTGCTACCAAGTGTAACTTTGAGCTTGATGTATTTATGATGGCTCAATATCCAGGTGGCAAACAGCGAAATCAACATGAATTTATGCAACTCGCAAATGCTGCTGGATTTAGGGGTGTTAGATATCAATGTCGTGCTCGTAATTTCTGGGTTATTGAATTCTTCAAGTAA 1005 0.4318 MQLVMSSVIPMALQTTFELGVFDIIAKAGEGAKLSANDIADQLPTKNPETPKMLDRLLGLLATHSILHCSNSSEEEEKERVVSQRLYSLTPVSKFFAHDADGMSLAPIMVVVQHKSFLESWVHLKDAILKGGRAFEMTHGVNPIEYLEKDSEFNKYFNTALTQHTCIVMKKILESYNGFENINTLVDVGGGLGLNLSMITSKYPHIKAINLDLPHVIQQAPPYPGVEHVAGDMFESWILHDWSDEKCLKLLKNCCAAILENGKVIAVESGITDVPHTTTATKCNFELDVFMMAQYPGGKQRNQHEFMQLANAAGFRGVRYQCRARNFWVIEFFK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0748 334 Pfam O-methyltransferase domain 121 316 IPR001077 GO:0008171
Sto1g0748 334 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 334 - -
Sto1g0748 334 Pfam Dimerisation domain 11 62 IPR012967 GO:0046983
Sto1g0748 334 SUPERFAMILY "Winged helix" DNA-binding domain 1 99 IPR036390 -
Sto1g0748 334 PIRSF O-mtase 1 334 IPR016461 GO:0008168
Sto1g0748 334 Gene3D Vaccinia Virus protein VP39 97 334 IPR029063 -
Sto1g0748 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 334 IPR016461 GO:0008168
Sto1g0748 334 PANTHER O-METHYLTRANSFERASE 1 334 IPR016461 GO:0008168
Sto1g0748 334 Gene3D - 1 96 IPR036388 -
Sto1g0748 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 332 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0748 Sto-Chr1 7556534 7558867 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0748 1 334 Monolignol Biosynthesis Gene Families AT5G54160 47.674 3.91e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0748 K13066 - zju:107423771 403.29