Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0722 ATGGTTCGGTGGGAGAAGTTTTTGCCCCGAATGGTGCTCAGAGTATTGCTTGTGGAAGCGGATGATTCTACTCGCCATATTATCGCTGCCCTTCTCCGCAAATGCAGTTATAGAGTTGCTGCAGTTCCTGATGGACTAAAGGCATGGGAGATGTTGAAGAGGAAAGCTTCTGACATAGATCTCATATTAACAGAAGTGGAATTGCCATCAATATCTGGATTTGCACTTCTTACTTTGATCATGGAGCATGATATTTGCAAGAACATTCCTGTCATAATGATGTCTTCTAATGATTCAGTTAACATGGCATTGAAATGCATTTTGAAAGGTGCAGCTGATTTTCTTATAAAACCTGTTCGGAGGAATGAGTTAAGGAACTTGTGGCAGCATGTATGGAGAAGGCTTGAGaTTAGCAGGCAACCtcaaaatttgacatttccaaaGAAAGAACTTGAAGTTACTTCTGAAAATAATGCTGCAAGCAATGATTCTAGTGGTTCTGTGGCTTCCACACAGAAAAATAATGGATGCAGCGAGAAAGTGAGTGAGGCCCAAAATATGCAGGGTACATCCCTTGTGAAGAGTTCTTCAAATTTGAGCAATACTAACATAGTGCAGCATGAAGAGTCAACCAAGATGGTAAATGAAGCAGCAGAGAAACCAATGGCATTGTTATCACTTGCTGCAAAGtgtaacaaaaattttaattcaaaatattttggGCTGGAACAAGGACATCATTGTGCTGGGACAGAGAGTCAAGAGGAAGTTCTAAGAGAAGAGTTAAGCAGAGGGAATCCTGATATGGATATAGAGCTTCATGATCATAATAAGGAACTTCTAGAACCTTCTAGAGGAGCCATTGACTTGATTGCCACATTCCAGAATTTACCAGAAAAGAATCATGAAAGCTGTAGTCTTAGTGATTGTGGTGCAAAGAAGTTTGATTTTGATCCAAGATTGGAACTTTCTTTAAGAAGAGATTTTCTTGGCAGCTCATGTAAACAAACAACTGATGAAAAGCAAGCATTGAACCATTCAAATGCTTCTGCCTTTTCTAGaactcatatatgCAGGTATAGTGAATCTAAGTTCCCAACACCCTCAATTAGTTCTGCTAAAGTAAGCAACACCGAGTGGAATACTCATGaatccaataaattatttggaaAGACTGTTGATACTTCTCATCAGTATAGTGGCACAAATCATAGTCATGAGAATGTGACAGCTACAGCCATTGGTCAGTGTGGACGAGAACTACAATCACCAAACAGTCAAATTGAACCATCTCCTGATACTGGGATTACTTCTGATCATAAGTCTACTGGATATGGTCATCTGTTCCCTTCTACATCCTATGCACAATCTGGTGTTCATACCATATGGAATCCAAAACCAGTCAACCGGAAAGAGAGTTCTCCTTCTCCCTTCCCCACAAGTAACTCTTTCCAGTCCAATCCTGGAAGTCACAACTCAGAACGAGGGTATCATCGTTCTGATGATGCCACCAATACTTCGCTTGATCAAACTGTACATGAAAAAAGCAATTTGGATTCTCTGACGCAAGATCCTCCTGCTACTGATCAGAGCACCAACAATAGTTTATGCCACGAAACTGcaaataataatcaaaataacaataCTAGTGCATGTAAATACACAAGCAGAAGTGATGGAAATGCTACTTCAGCTGCGATAGGTGAGAGTAACCCTGAAAGTTTTGGTGACAGTGCAGAACATAATTATGATGGGTTCATAGGAATAGATTCTCATCGCCCCAGCCCAAGAGAAGCAGCTCTGACAAAGTTTCGAATGAAACGGAAAGACAGGTGCTATGAGAAAAAGGTCCGATATCAAAGCCGGAAAAAACTAGCAGAGCAGCGTCCTCGGGTGAAGGGGCAGTTCGTACGCTTAGTACATAACAATGATCATCCCATTCCTGATGCTGGTGGTGGTTCCTGA 1965 0.3964 MVRWEKFLPRMVLRVLLVEADDSTRHIIAALLRKCSYRVAAVPDGLKAWEMLKRKASDIDLILTEVELPSISGFALLTLIMEHDICKNIPVIMMSSNDSVNMALKCILKGAADFLIKPVRRNELRNLWQHVWRRLEISRQPQNLTFPKKELEVTSENNAASNDSSGSVASTQKNNGCSEKVSEAQNMQGTSLVKSSSNLSNTNIVQHEESTKMVNEAAEKPMALLSLAAKCNKNFNSKYFGLEQGHHCAGTESQEEVLREELSRGNPDMDIELHDHNKELLEPSRGAIDLIATFQNLPEKNHESCSLSDCGAKKFDFDPRLELSLRRDFLGSSCKQTTDEKQALNHSNASAFSRTHICRYSESKFPTPSISSAKVSNTEWNTHESNKLFGKTVDTSHQYSGTNHSHENVTATAIGQCGRELQSPNSQIEPSPDTGITSDHKSTGYGHLFPSTSYAQSGVHTIWNPKPVNRKESSPSPFPTSNSFQSNPGSHNSERGYHRSDDATNTSLDQTVHEKSNLDSLTQDPPATDQSTNNSLCHETANNNQNNNTSACKYTSRSDGNATSAAIGESNPESFGDSAEHNYDGFIGIDSHRPSPREAALTKFRMKRKDRCYEKKVRYQSRKKLAEQRPRVKGQFVRLVHNNDHPIPDAGGGS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0722 654 SUPERFAMILY CheY-like 13 144 IPR011006 -
Sto1g0722 654 ProSiteProfiles Response regulatory domain profile. 14 132 IPR001789 GO:0000160
Sto1g0722 654 SMART REC_2 13 128 IPR001789 GO:0000160
Sto1g0722 654 PANTHER PRR RESPONSE REGULATOR 8 179 - -
Sto1g0722 654 PANTHER PRR RESPONSE REGULATOR 183 632 - -
Sto1g0722 654 Pfam CCT motif 597 638 IPR010402 GO:0005515
Sto1g0722 654 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 179 IPR045279 GO:0009736
Sto1g0722 654 PANTHER TWO-COMPONENT RESPONSE REGULATOR 183 632 IPR045279 GO:0009736
Sto1g0722 654 MobiDBLite consensus disorder prediction 503 577 - -
Sto1g0722 654 MobiDBLite consensus disorder prediction 463 493 - -
Sto1g0722 654 MobiDBLite consensus disorder prediction 463 579 - -
Sto1g0722 654 MobiDBLite consensus disorder prediction 621 654 - -
Sto1g0722 654 Pfam Response regulator receiver domain 15 126 IPR001789 GO:0000160
Sto1g0722 654 Gene3D - 11 276 - -
Sto1g0722 654 ProSiteProfiles CCT domain profile. 597 639 IPR010402 GO:0005515
Sto1g0722 654 MobiDBLite consensus disorder prediction 420 449 - -
Sto1g0722 654 MobiDBLite consensus disorder prediction 153 196 - -
Sto1g0722 654 CDD psREC_PRR 15 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0722 Sto-Chr1 7198972 7203559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0722 597 646 Response Regulator Gene Family AT5G24470 84.000 2.30e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Sto1g0722 Response_reg 7.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0722 K12130 - gmx:100809490 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0722 1 7198972 7203559 Sto1g0722 1 7198972 7203559 ECH