Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0678 ATGACCTTAAAGAAGGCCACAGAAGAGCTAGATAGGGTTATTGGCAGACATAGATGGGTCAAAGAGGAGGACATTGCTAAATTGCCCTACATGGAAGCAATAGTCAAAGAAACAATGAGGTTGCACCCATTGGCCCCATTGATTACTCCAAGGCTAGCTAGATATGACTGCAATGTTGGAGGGTATGACATCCCTAAAGGGACCATAGTTCTAGTCAATGTGTGGGCGATTGGGAGAGACCCTTCAATTTGGGACAATCCTAATGAATTTtttccagaaagatttaaaGATAAGACGATTGATGTGAAAGGACACAACTTTGAGTTGTTACCATTTGGGGCAGGTAGAAGAGCATGTCTTGGAAACAATCTCGGCCTTAAGGTGGTTCAATCAACTTTGGCAAATATGGTGCATGGGTTTTCATGGAGATTGCCAGGTAATATGAAGGAGGAGGACTTGAATATGGACGAAATTTCCCTCCTCACCACATCAAAAAAGAACCTCTTGTTGTTGTGGCTGAGGCTAGACTTCCATCACATCTTTATACTGCGCTTGGATCGTCTGAAGTTCACTTTCCATAAAGTTTGTTCAAACACACTATTAAGCCACTAG 612 0.4167 MTLKKATEELDRVIGRHRWVKEEDIAKLPYMEAIVKETMRLHPLAPLITPRLARYDCNVGGYDIPKGTIVLVNVWAIGRDPSIWDNPNEFFPERFKDKTIDVKGHNFELLPFGAGRRACLGNNLGLKVVQSTLANMVHGFSWRLPGNMKEEDLNMDEISLLTTSKKNLLLLWLRLDFHHIFILRLDRLKFTFHKVCSNTLLSH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0678 203 SUPERFAMILY Cytochrome P450 3 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 Gene3D Cytochrome P450 2 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 PRINTS E-class P450 group I signature 32 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 PRINTS E-class P450 group I signature 73 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 PRINTS E-class P450 group I signature 109 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 PRINTS E-class P450 group I signature 119 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 Pfam Cytochrome P450 4 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 PRINTS P450 superfamily signature 33 44 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 PRINTS P450 superfamily signature 110 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 PRINTS P450 superfamily signature 119 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g0678 203 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 112 121 IPR017972 GO:0005506|GO:0016705
Sto1g0678 203 PANTHER CYTOCHROME P450 98A9 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0678 Sto-Chr1 6697220 6697831 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0678 2 169 Cytochrome P450 AT2G45550 54.167 4.04e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0678 K20623 - gmx:100791502 259.996