LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto1g0676	CTGGAATCGGAAGTCGCGAAACAGTTAAACGACattggaaaagaagaagaagaaagcttCAGTTATGCGATGCAGTTGGTGATGTCAAGTGTGTTGTCGATGGCGTTGCAAACGACAGTCGAGCTGGGCGTTTTCGACGTCATAGCGAAAGCCGGCGAAGGCGCCAAGCTCTCAGCAAACGACATTGCGGATCAGCTTCCAACGAAGAACCCAGATGCACCCAAAATGCTGGATCGCCTGCTTGGGCTTCTCACTACTCACTCTCTTCTTCATTGCTATTCAGCTCAGACTCATACTGATGATGCGTCCACTGTGTCCCAAAGGCTCTATAGCCTCGCTCCTGCGTCCAAGTTCTTCGCTCATGACGCTGATGCTATGTCGCTGGGGCCCATCTTGACCTTGATTCAGCACAAGGTCTTCTTGGAAAGCTGGGTTCATCTGAAAGATGCAATTCTGAAAGGAGGAAGTCCTTTTGAGAAGGCTCATGGAGTGCACCAATTTGAGTACCTCGGGCTGGATTCAGAGTTCAATAAAATCTTTAATATATCATTGACCCAACACACTTCCATAGTTATGAAAAAGATTCTTGAATCTTATAAAGGCTTTGAGAATCTCAACACCCTTGTGGACGTTGGAGGAGGCCTAGGCTTCAATCTCAGCATGATCACTTCTAAATACCCTCATATTAAGGCTATCAATTTTGACTTGTCCCATGTCATCCAACAAGCTCCTCCTTATCCTGGAGTGGAACATATGGCTGGAGATATGTTTGAAAGTGTACCTAAAGCAGATGCTATTTTTATGAAGTGGATTCTTCATGATTGGAGCGATGAGAAGTGTGTGACATTGTTGAAGAACTGCTATGATGCAACTCCAGAAAACGGGAAGGTGATTGCAGTTGAATCAGGCATAACAGCTATGCCTGACACCACTGCTTCTACAAAGTGTAACTTCGAAGTTGATGTTTTCATGATGGCTCAAGATCCAGGTGGCAAAGAACGAAATCAATATGAATTCTTGCAACTTGCAAAAGCTGCTGGATTTAAGGGTATTAAATATCAGTGTCGTGCTCGTAATTTCTGGGTTATTGAGTTCTTGAAGTAA	1104	0.4357	LESEVAKQLNDIGKEEEESFSYAMQLVMSSVLSMALQTTVELGVFDVIAKAGEGAKLSANDIADQLPTKNPDAPKMLDRLLGLLTTHSLLHCYSAQTHTDDASTVSQRLYSLAPASKFFAHDADAMSLGPILTLIQHKVFLESWVHLKDAILKGGSPFEKAHGVHQFEYLGLDSEFNKIFNISLTQHTSIVMKKILESYKGFENLNTLVDVGGGLGFNLSMITSKYPHIKAINFDLSHVIQQAPPYPGVEHMAGDMFESVPKADAIFMKWILHDWSDEKCVTLLKNCYDATPENGKVIAVESGITAMPDTTASTKCNFEVDVFMMAQDPGGKERNQYEFLQLAKAAGFKGIKYQCRARNFWVIEFLK	367

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Sto1g0676	367	PANTHER	CAFFEIC ACID O-METHYLTRANSFERASE	13	367	-	-
Sto1g0676	367	SUPERFAMILY	"Winged helix" DNA-binding domain	14	122	IPR036390	-
Sto1g0676	367	Gene3D	-	2	119	IPR036388	-
Sto1g0676	367	PIRSF	O-mtase	2	367	IPR016461	GO:0008168
Sto1g0676	367	Pfam	O-methyltransferase domain	144	349	IPR001077	GO:0008171
Sto1g0676	367	PANTHER	O-METHYLTRANSFERASE	13	367	IPR016461	GO:0008168
Sto1g0676	367	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	24	367	IPR016461	GO:0008168
Sto1g0676	367	Gene3D	Vaccinia Virus protein VP39	120	367	IPR029063	-
Sto1g0676	367	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	126	365	IPR029063	-
Sto1g0676	367	Pfam	Dimerisation domain	34	85	IPR012967	GO:0046983

Showing 1 to 10 of 10 entries

Previous1Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto1g0676	Sto-Chr1	6638014	6639969	Dispersed/Proximal

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto1g0676	3	367	Monolignol Biosynthesis Gene Families	AT5G54160	52.603	3.42e-139	398

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto1g0676	K13066		-	zju:107423771	460.299

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto1g0676	1	6638014	6639969	Sto1g0676	1	6638014	6639969	ECH

Showing 1 to 1 of 1 entries

Previous1Next