Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0676 CTGGAATCGGAAGTCGCGAAACAGTTAAACGACattggaaaagaagaagaagaaagcttCAGTTATGCGATGCAGTTGGTGATGTCAAGTGTGTTGTCGATGGCGTTGCAAACGACAGTCGAGCTGGGCGTTTTCGACGTCATAGCGAAAGCCGGCGAAGGCGCCAAGCTCTCAGCAAACGACATTGCGGATCAGCTTCCAACGAAGAACCCAGATGCACCCAAAATGCTGGATCGCCTGCTTGGGCTTCTCACTACTCACTCTCTTCTTCATTGCTATTCAGCTCAGACTCATACTGATGATGCGTCCACTGTGTCCCAAAGGCTCTATAGCCTCGCTCCTGCGTCCAAGTTCTTCGCTCATGACGCTGATGCTATGTCGCTGGGGCCCATCTTGACCTTGATTCAGCACAAGGTCTTCTTGGAAAGCTGGGTTCATCTGAAAGATGCAATTCTGAAAGGAGGAAGTCCTTTTGAGAAGGCTCATGGAGTGCACCAATTTGAGTACCTCGGGCTGGATTCAGAGTTCAATAAAATCTTTAATATATCATTGACCCAACACACTTCCATAGTTATGAAAAAGATTCTTGAATCTTATAAAGGCTTTGAGAATCTCAACACCCTTGTGGACGTTGGAGGAGGCCTAGGCTTCAATCTCAGCATGATCACTTCTAAATACCCTCATATTAAGGCTATCAATTTTGACTTGTCCCATGTCATCCAACAAGCTCCTCCTTATCCTGGAGTGGAACATATGGCTGGAGATATGTTTGAAAGTGTACCTAAAGCAGATGCTATTTTTATGAAGTGGATTCTTCATGATTGGAGCGATGAGAAGTGTGTGACATTGTTGAAGAACTGCTATGATGCAACTCCAGAAAACGGGAAGGTGATTGCAGTTGAATCAGGCATAACAGCTATGCCTGACACCACTGCTTCTACAAAGTGTAACTTCGAAGTTGATGTTTTCATGATGGCTCAAGATCCAGGTGGCAAAGAACGAAATCAATATGAATTCTTGCAACTTGCAAAAGCTGCTGGATTTAAGGGTATTAAATATCAGTGTCGTGCTCGTAATTTCTGGGTTATTGAGTTCTTGAAGTAA 1104 0.4357 LESEVAKQLNDIGKEEEESFSYAMQLVMSSVLSMALQTTVELGVFDVIAKAGEGAKLSANDIADQLPTKNPDAPKMLDRLLGLLTTHSLLHCYSAQTHTDDASTVSQRLYSLAPASKFFAHDADAMSLGPILTLIQHKVFLESWVHLKDAILKGGSPFEKAHGVHQFEYLGLDSEFNKIFNISLTQHTSIVMKKILESYKGFENLNTLVDVGGGLGFNLSMITSKYPHIKAINFDLSHVIQQAPPYPGVEHMAGDMFESVPKADAIFMKWILHDWSDEKCVTLLKNCYDATPENGKVIAVESGITAMPDTTASTKCNFEVDVFMMAQDPGGKERNQYEFLQLAKAAGFKGIKYQCRARNFWVIEFLK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0676 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 367 - -
Sto1g0676 367 SUPERFAMILY "Winged helix" DNA-binding domain 14 122 IPR036390 -
Sto1g0676 367 Gene3D - 2 119 IPR036388 -
Sto1g0676 367 PIRSF O-mtase 2 367 IPR016461 GO:0008168
Sto1g0676 367 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Sto1g0676 367 PANTHER O-METHYLTRANSFERASE 13 367 IPR016461 GO:0008168
Sto1g0676 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 367 IPR016461 GO:0008168
Sto1g0676 367 Gene3D Vaccinia Virus protein VP39 120 367 IPR029063 -
Sto1g0676 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 365 IPR029063 -
Sto1g0676 367 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0676 Sto-Chr1 6638014 6639969 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0676 3 367 Monolignol Biosynthesis Gene Families AT5G54160 52.603 3.42e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0676 K13066 - zju:107423771 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0676 1 6638014 6639969 Sto1g0676 1 6638014 6639969 ECH