Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0672 ATGGCGTTGCAAACGACAATCGAGCTCGGCGTTTTCGACGTCATAGCGAAAGCCGGGGAAGGCGCCAAGCTCTCAGCAAACGACATTGCGGATCAGCTTCCAACGAAGAACCCAGACGCACCCAAAATGCTGGATCGCCTGCTTGGGCTGCTCGCTACGCACTCTATTCTTCATTGCTCTTCAGCCCAGACTCatactgatgatgatgatgcgtCCACTGTGTCCCAAAGGCTCTATAGCCTCGCACCGGCGTCCAAGTTCTTCGCTCGTGACGCTGATGCTATGTCGTTGGGGCCCATCTTGACCTTGATTCAGCACAAGGTCTTCTTGGAAAGCTGGGATCATCTGAAAGATACAATTATGGAAGGAGGAAGTCCTTTTGAGAAGGCTCATGGAGTGCACCAATTTGAGTATCTTGGGTTGGACTCAGagttcaataaaatttttaacatatcattgaCCCAACACACTTCCATAGTTATGAAGAAGATTCTTGAATCTTATAAAGGATTTGAGAATCTCAACACCCTTGTGGACGTTGGAGGAGGCCTAGGCTTCAACCTTAGTATGATCACTTCCAAATATCCGCATATTAAGGCTATCAATTTTGACTTGTCCCATGTCATCCAACAAGCTCCTCCTTATCTTGGAGTGGAACATGTGGCTGGAGATATGTTTGAAAGTGTACCTAAGGCAGATGCTATTTTTATGAAGGTGATTGCAGTTGAATCAGGCATAACTGCTATGCTTGACACCACTGCTTCTACAAAGTGTAACTTTGAAGTTGATGTTTTCATGATGGCTCAAGATCCAGGTGGCAAAGAACGAAATCAACATGAATTCTTGCAACTCGCAAAAGCTGCTGGATTTAAGGAGGATACGACTATCGAACATCATCGAAAGCATGCCATTCGTACAATCGTCAAGTATACGCAGGGCAATGTATACAAGTTCGGATCAACCTGGTATGGCTTTAGTGGCTtcgccattgaccaaattgaaCTATCTGACATGGAGTATGGCGGTAAGGCCTGCGTTGGAAGCCTCGACTTCATTGATCGATCATTGCCTCCTCCGTTGATAGTGTTGGGCCTGGACAAGTTGAGCCCAATTCGGTTATGGAGCAGAACAAGCAGAGTATGGAAAAGGCCAATGAGGATGTGGCAATTTGCAGAAGCAAACGTGTAA 1188 0.4402 MALQTTIELGVFDVIAKAGEGAKLSANDIADQLPTKNPDAPKMLDRLLGLLATHSILHCSSAQTHTDDDDASTVSQRLYSLAPASKFFARDADAMSLGPILTLIQHKVFLESWDHLKDTIMEGGSPFEKAHGVHQFEYLGLDSEFNKIFNISLTQHTSIVMKKILESYKGFENLNTLVDVGGGLGFNLSMITSKYPHIKAINFDLSHVIQQAPPYLGVEHVAGDMFESVPKADAIFMKVIAVESGITAMLDTTASTKCNFEVDVFMMAQDPGGKERNQHEFLQLAKAAGFKEDTTIEHHRKHAIRTIVKYTQGNVYKFGSTWYGFSGFAIDQIELSDMEYGGKACVGSLDFIDRSLPPPLIVLGLDKLSPIRLWSRTSRVWKRPMRMWQFAEANV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0672 395 Pfam Dimerisation domain 1 52 IPR012967 GO:0046983
Sto1g0672 395 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 2 240 - -
Sto1g0672 395 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 238 299 - -
Sto1g0672 395 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 240 IPR016461 GO:0008168
Sto1g0672 395 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 95 295 IPR029063 -
Sto1g0672 395 Gene3D Vaccinia Virus protein VP39 89 241 IPR029063 -
Sto1g0672 395 Gene3D Vaccinia Virus protein VP39 242 305 IPR029063 -
Sto1g0672 395 PANTHER O-METHYLTRANSFERASE 238 299 IPR016461 GO:0008168
Sto1g0672 395 PANTHER O-METHYLTRANSFERASE 2 240 IPR016461 GO:0008168
Sto1g0672 395 Pfam O-methyltransferase domain 113 240 IPR001077 GO:0008171
Sto1g0672 395 Gene3D - 1 88 IPR036388 -
Sto1g0672 395 SUPERFAMILY "Winged helix" DNA-binding domain 1 91 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0672 Sto-Chr1 6583747 6609599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0672 1 291 Monolignol Biosynthesis Gene Families AT5G54160 47.170 1.58e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0672 K13066 - zju:107423771 345.895