Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0668 ATGCAGTTGGTGATGTCGAGTGTGTTGTCAATGGCGTTGCAAACGACATTTGAGCTGGGCGTTTTCGACGTCATAGCGAAAGCCGGGGAAGGCGCCAAGCTCTCAGCAAACGACATTGCGGATCAGCTTCCAACGAAGAACCCAGACGCACCCAAAATGCTGGATCGCCTGCTTGGGCTGCTCGCTACGCACTCTATTCTTCATTGCTCTTCAGCCCAGACTCatactgatgatgatgatgcgtCCACTGTGTCCCAAAGGCTCTATAGCCTCGCACCGGCGTCCAAGTTCTTCGCTCGTGACGCTGATGCTATGTCGTTGGGGCCCATCTTGACCTTGATTCAGCACAAGGTCTTCTTGGAAAGCTGGGTTCATCTGAAAGATGCAATTCTGGAAGGAGGAAGTCCTTTTGAAATGGCTCATGGAGTGCACCAATTTGAGTATTTTGGGTTGAACTCTGAgttcaataaaattttcaacatATCATTGACCCAGCACACTTCTATAGTTATGAAGAAGATTCTTGAATCTTACAAAGGCTTTGAGAATCTCAACACCCTTGTGGATGTTGGAGGAGGCTTAGGCTTCAACCTCAGTATGATCACTTCCAAATACCCTCATATTAAGGCTATCAATTTTGACTTGCCTCACGTCATCCAACAAGCCCCTCCTTATCCTGGAGTAGAACACGTGGTTGGAAATATGTTTGAAAGTGTACCCAAGGCAGATGCTATTTTTATGAAGTGGATTCTTCATGATTGGAGCGATGAGAAGTGTGTAACATTGTTGAAGAATTGCTATGATGCAACTCCAGAAAATGGGAAGGTGATTGCAGTTGAATCAGGCATAACAGTGATGCCTGACACCACTGTTTCTACAAAGTGTAACTTCGAACTTGATGTTTTCACGATGGCTCAAGATCCAGGTGGCAAACAACGAAATCAACATGAATTCTTGCAACTCGCAAAAGCTGCTGGATTTAAGGGTATTAAATACCAGTGTCGTGCTCGTAATTTCTGGGTTATCGAGTTCTTCAAATAA 1041 0.4371 MQLVMSSVLSMALQTTFELGVFDVIAKAGEGAKLSANDIADQLPTKNPDAPKMLDRLLGLLATHSILHCSSAQTHTDDDDASTVSQRLYSLAPASKFFARDADAMSLGPILTLIQHKVFLESWVHLKDAILEGGSPFEMAHGVHQFEYFGLNSEFNKIFNISLTQHTSIVMKKILESYKGFENLNTLVDVGGGLGFNLSMITSKYPHIKAINFDLPHVIQQAPPYPGVEHVVGNMFESVPKADAIFMKWILHDWSDEKCVTLLKNCYDATPENGKVIAVESGITVMPDTTVSTKCNFELDVFTMAQDPGGKQRNQHEFLQLAKAAGFKGIKYQCRARNFWVIEFFK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0668 346 SUPERFAMILY "Winged helix" DNA-binding domain 1 101 IPR036390 -
Sto1g0668 346 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 346 - -
Sto1g0668 346 Gene3D Vaccinia Virus protein VP39 99 346 IPR029063 -
Sto1g0668 346 Pfam O-methyltransferase domain 123 328 IPR001077 GO:0008171
Sto1g0668 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 344 IPR029063 -
Sto1g0668 346 Gene3D - 1 98 IPR036388 -
Sto1g0668 346 PANTHER O-METHYLTRANSFERASE 1 346 IPR016461 GO:0008168
Sto1g0668 346 PIRSF O-mtase 1 346 IPR016461 GO:0008168
Sto1g0668 346 Pfam Dimerisation domain 11 62 IPR012967 GO:0046983
Sto1g0668 346 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 346 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0668 Sto-Chr1 6565844 6567990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0668 1 346 Monolignol Biosynthesis Gene Families AT5G54160 52.601 2.93e-134 385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0668 1 6565844 6567990 Sto1g0668 1 6565844 6567990 ECH