Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0666 TTGTTAAGCATACCCAAAGCAGAACCCAGGAGGGCAAAACGACATCGAGACTCCAACAAGCACCCAGAGTATTGCGGGATTCGCATGCGAAATTGGGGGAAATGGGTTTCCGAAATTCGCGAGCCACGCAAGAAATCGCGAATCTGGCTGGGTACATTCCCCACTCCAAAATTGACAGCAAGAGCACACGACGTCTCAACACTGAGCATAAAGGAGCTTCCCAGGTTGGAAACAAGCTATGACGACACAGACACTACTCTGGAATTGGAAATTATTCCAGAAAATTTTCAGCAAAACGACGTcggaaaagaagaaagggaagaagaagaaagcttCTGCTACGCGATGCAGTTGGCGATGTCGAGTGTGCTGTCAATGGCGTTGCAAACGACATTCGAGCTCGGCGTTTTCGACGTCATAGCGAAAGCCGGTGAAGGCGCCAAGCTCTCAGCAAACGACATTGCGGATCAGCTTCCAACAAAGAACCCAGACGCACCCAAAATGCTAGATCGCCTGCTTGGGCTTCTCGCTACGCACTCTATTCTTGATTGCTCTTCAGCTCAGAATCATagtgatgaagaagaaaaagaacaagaagaaggagTTATGTCCCAAAGGCTCTATAGCCTCACTCCGACATCCAAGCTTTTCGCTCCAGATGCTGATTCTATGTCACTGGGTTCCTGCTTGAGCGTGATTCAGCACAAGGTCTTCTTGGAAAGTTGCCCTTTTGAAAGGGCTCATGGAGTGCACCAGTTTGAATACCTTGGGTTGGACTCAGAGTTAAACAAGATTTTCAACATATCATTGACTCAACACACTTCTATAGTTATGAGGAAGGTTCTAGAATCTTACaaagGAGTGGAATACGTGGCTGGAGATATGTTTGAAAGTGTACCTAAGGCAGACGCCATTTTTATGAAGTGGATTCTTCATGATTGGAGCGATGAGAAATGCGTGAAACTGTTAAAGAACTGTTATGATGCGACTCCTAAAAATGGAAAGGTGATTGCACTTGAAACAGGCATAACAGTTATGCCTGACACCACTGCTTCTACGAAGTGTAACTTTGAATTTGATGTTTTTATGATGGCTCAAGATCCAGGTGACAAAGAGCGAACTCAATATGAATTCATGCAACTCGCAAAGGCGGCTGGATTTAGCGGTGTTAAATACCAATGTCGTGCTTGTAATTTTTGGGTTATTGAGTTCTTTAAGTAG 1221 0.4275 LLSIPKAEPRRAKRHRDSNKHPEYCGIRMRNWGKWVSEIREPRKKSRIWLGTFPTPKLTARAHDVSTLSIKELPRLETSYDDTDTTLELEIIPENFQQNDVGKEEREEEESFCYAMQLAMSSVLSMALQTTFELGVFDVIAKAGEGAKLSANDIADQLPTKNPDAPKMLDRLLGLLATHSILDCSSAQNHSDEEEKEQEEGVMSQRLYSLTPTSKLFAPDADSMSLGSCLSVIQHKVFLESCPFERAHGVHQFEYLGLDSELNKIFNISLTQHTSIVMRKVLESYKGVEYVAGDMFESVPKADAIFMKWILHDWSDEKCVKLLKNCYDATPKNGKVIALETGITVMPDTTASTKCNFEFDVFMMAQDPGDKERTQYEFMQLAKAAGFSGVKYQCRACNFWVIEFFK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0666 406 Gene3D Vaccinia Virus protein VP39 219 284 IPR029063 -
Sto1g0666 406 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Sto1g0666 406 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Sto1g0666 406 SUPERFAMILY DNA-binding domain 24 70 IPR016177 GO:0003677
Sto1g0666 406 Gene3D AP2/ERF domain 23 79 IPR036955 GO:0003700|GO:0006355
Sto1g0666 406 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 95 290 - -
Sto1g0666 406 Gene3D Vaccinia Virus protein VP39 285 396 IPR029063 -
Sto1g0666 406 SMART rav1_2 23 85 IPR001471 GO:0003700|GO:0006355
Sto1g0666 406 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 286 406 IPR016461 GO:0008168
Sto1g0666 406 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 285 406 - -
Sto1g0666 406 CDD AP2 24 70 IPR001471 GO:0003700|GO:0006355
Sto1g0666 406 Pfam AP2 domain 24 65 IPR001471 GO:0003700|GO:0006355
Sto1g0666 406 Gene3D - 93 216 IPR036388 -
Sto1g0666 406 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 242 404 IPR029063 -
Sto1g0666 406 MobiDBLite consensus disorder prediction 7 22 - -
Sto1g0666 406 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Sto1g0666 406 PANTHER O-METHYLTRANSFERASE 95 290 IPR016461 GO:0008168
Sto1g0666 406 PANTHER O-METHYLTRANSFERASE 285 406 IPR016461 GO:0008168
Sto1g0666 406 MobiDBLite consensus disorder prediction 1 22 - -
Sto1g0666 406 Pfam O-methyltransferase domain 286 388 IPR001077 GO:0008171
Sto1g0666 406 Pfam Dimerisation domain 126 177 IPR012967 GO:0046983
Sto1g0666 406 SUPERFAMILY "Winged helix" DNA-binding domain 106 220 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0666 Sto-Chr1 6529689 6536557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0666 108 406 Monolignol Biosynthesis Gene Families AT5G54160 39.944 1.55e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto1g0666 Methyltransf_2 3.7e-31 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0666 K13066 - zju:107423771 342.043