Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0662 ATGCAGTTGGCGACTTCCACTGTGATTTCCATGTCGCTGCAAACGGCGACGAATCTCGGCATTTTCGATGTCATTGCCGGAGCCGGTCCCGATGCCATGCTGTCTGCAGTGGAGATCGCGGCTGGGCTCTCTTGCAAGAACCCCGAAGCGCCCTCTGCCATCGATCGTCTTCTCCAATTGTTGGCGTCTCACTCCGTGCTTCGATGTTCGGTGGTCGGAGATGAAAATGAAGGGATGGGATCTCTCCGGCGACTCTACGGCCTCGCTCCGGTGGCCCGATACTTTGTGACAAATGCTGATGGTGCATCTTTGGGCCCCTTCATGGCATTGATTCAAGATAAGGTCTTCCTTGAGAGCTGGACCTTACTAAAAGATGCAATTATGGAAGGAGGTATTGCGTTCAATAAAGTGTATGGCACACATGCCTTCGAGTATCCGAATTTGGACTCAAGGTTCAATGAGGTTTTCAACAAGGCAATGCTGAATCAAACCACTATAGTTGTGAACAAGATTCTTGATTCCTACAAAGGTTTTAATGACATTAATAGACTTGTTGATGTTGGTGGTGGTCTTGGGATTACTCTCAAACTCATCACTTCTAAATACCCTCATATTCAGGGTATCAATTTCGACTTGCCTCATGTTGTAAGACATGCTTCGCCCTACAATGGAGTGGAGCATATTGGGGGAGATATGTTTGAAAGTTTACCTAAAGGAGATGCCATCTTTATGAAGtgGATACTCCATGATTGGAGTGATGAACGGTGCTTGAAACTTTTGAAGAACTGCTATGATGCTATTCCCGATGAGGGAAAGGTGATAGTGATGGAAGCAGTACTTCCTGTTGTACCAGAGACAAATGCTTCTTTGAAGAGTACCTTCCAAATCGATGTTCTTATGATGACTCAAAATCCAGGAGGCAAAGAAAGGACTCAACATGAATTTTTGGATTTGGCAAAAAAAGCTGGATTTAGTGGCATTAGATATGAATGCTTTGTTTGTAATTTATGGATTATGGAGTTCTTCAAGTAG 1032 0.4448 MQLATSTVISMSLQTATNLGIFDVIAGAGPDAMLSAVEIAAGLSCKNPEAPSAIDRLLQLLASHSVLRCSVVGDENEGMGSLRRLYGLAPVARYFVTNADGASLGPFMALIQDKVFLESWTLLKDAIMEGGIAFNKVYGTHAFEYPNLDSRFNEVFNKAMLNQTTIVVNKILDSYKGFNDINRLVDVGGGLGITLKLITSKYPHIQGINFDLPHVVRHASPYNGVEHIGGDMFESLPKGDAIFMKWILHDWSDERCLKLLKNCYDAIPDEGKVIVMEAVLPVVPETNASLKSTFQIDVLMMTQNPGGKERTQHEFLDLAKKAGFSGIRYECFVCNLWIMEFFK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0662 343 Gene3D Vaccinia Virus protein VP39 153 332 IPR029063 -
Sto1g0662 343 Gene3D - 8 171 IPR036388 -
Sto1g0662 343 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 343 IPR016461 GO:0008168
Sto1g0662 343 SUPERFAMILY "Winged helix" DNA-binding domain 1 98 IPR036390 -
Sto1g0662 343 PANTHER O-METHYLTRANSFERASE 1 343 IPR016461 GO:0008168
Sto1g0662 343 Pfam O-methyltransferase domain 120 325 IPR001077 GO:0008171
Sto1g0662 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 341 IPR029063 -
Sto1g0662 343 Pfam Dimerisation domain 11 62 IPR012967 GO:0046983
Sto1g0662 343 PIRSF O-mtase 1 343 IPR016461 GO:0008168
Sto1g0662 343 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0662 Sto-Chr1 6503293 6509182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0662 1 343 Monolignol Biosynthesis Gene Families AT5G54160 52.187 1.08e-133 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0662 K13066 - zju:107423771 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0662 1 6503293 6509182 Sto1g0662 1 6503293 6509182 ECH