Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0661 ATGGCTCAATTTTTGGAACAAACCGAAGCAGCAAGACTCGTCGTGAACGGAAAAGAgaagaataattttattgaaGCACCGAAGAAGCatcaagaagaacaagaagaagaaagctTCTCTTATGCCATGCAGATTGCACTTTCCACGGTGACGTCCTTCGCGGTGCAAACGGCGGCCGAGCTCGGCGTTTTCGACATCATCCACAAAGCCGGTGGCGCCGACGGCGCCGCGAAGCTGATCTCGGCCGAGGAGATCGCGTCTCGGTTGTCATGCAAGAACCCTGACGCGCCGTCCATGATCGATCGTCTCCTCTGCCTTCTGGCGTCCCACTCGGTGCTTCGATGTTCCGTGGTCTGCCGCGATGACAACGGGCTGAACAAGGGAGGTTTCCGGCGGCTCTACGGCCTCGCTCCGGTGGCTAGATTCTTTGTAAGGGACGCTAATGGCCTGTCGTCGTTAAAGCCGTTTATGGAGTTGACTCAGCACAAAGTTTCACTTGACATGTGGTCGTACTTGAAAGATTCAATTTTGGAAGGTGGTGTTGCATTCGACAAGTTTTCTGGCGTACCATTATTTGAGTATTTGAGTAAAGACGCGAAGTATAGTGCCATATTTAACCAAGCAATGATTAATCAAAGCACTATAGCTATGACGAAGATTCTAGAAACCTACAAAGGCTTTGAGGGTATCAAGAAGCTTGTGGATGTTGGTGGCGGGTTAGGTTTGACTCTCAAATTGATCACTTCTAAATATCTTCATATTCAGGGTATTAATTTCGACTTGCCTCATGTTATACAACAAGCAACTCCTTATCCTGGAGTGGAACACGTCATGGGAGATATGTTTACAAGTGTGCCCAAAGGAGATGCCATCTTTATGAAGTGGATACTTCACAACTGGAGTGATGAACGGTGCGTGAAGCTTTTGAAGAACTGTTATGAATCCCTTCCCGATGAGGGAAAAGTGATTGTGGTGGACGCAGTTCTTCCCATTGTGCCAGATACAAGTGCTTCTGTAAAAAGCACTTCCCAATTCGATGTTCTTATGATGGCTTGTATCCCAGTTGGTGGTAAAGAGCGAAGTGAACAAGAGTTCATGGATTTGGCAACATCAGCTGGATTTAGTGGTGTTCAATTTAAATGCTTTGTTCGTAACTTGTGGGTTATGGAGTTCTTTAAGTAG 1182 0.4535 MAQFLEQTEAARLVVNGKEKNNFIEAPKKHQEEQEEESFSYAMQIALSTVTSFAVQTAAELGVFDIIHKAGGADGAAKLISAEEIASRLSCKNPDAPSMIDRLLCLLASHSVLRCSVVCRDDNGLNKGGFRRLYGLAPVARFFVRDANGLSSLKPFMELTQHKVSLDMWSYLKDSILEGGVAFDKFSGVPLFEYLSKDAKYSAIFNQAMINQSTIAMTKILETYKGFEGIKKLVDVGGGLGLTLKLITSKYLHIQGINFDLPHVIQQATPYPGVEHVMGDMFTSVPKGDAIFMKWILHNWSDERCVKLLKNCYESLPDEGKVIVVDAVLPIVPDTSASVKSTSQFDVLMMACIPVGGKERSEQEFMDLATSAGFSGVQFKCFVRNLWVMEFFK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0661 393 Gene3D Vaccinia Virus protein VP39 146 393 IPR029063 -
Sto1g0661 393 PIRSF O-mtase 20 393 IPR016461 GO:0008168
Sto1g0661 393 Pfam Dimerisation domain 55 108 IPR012967 GO:0046983
Sto1g0661 393 SUPERFAMILY "Winged helix" DNA-binding domain 33 146 IPR036390 -
Sto1g0661 393 PANTHER O-METHYLTRANSFERASE 29 393 IPR016461 GO:0008168
Sto1g0661 393 Pfam O-methyltransferase domain 169 375 IPR001077 GO:0008171
Sto1g0661 393 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 393 IPR016461 GO:0008168
Sto1g0661 393 Gene3D - 19 143 IPR036388 -
Sto1g0661 393 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 29 393 - -
Sto1g0661 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 391 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0661 Sto-Chr1 6486677 6497916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0661 35 393 Monolignol Biosynthesis Gene Families AT5G54160 49.861 4.77e-126 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0661 K13066 - gmx:100803633 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0661 1 6486677 6497916 Sto1g0661 1 6486677 6497916 ECH