Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0657 ATGTCTCAATTTGTGGAAGAAACCGAAACAGCAAGACTCGTCGTGAACGGAAAAGAGAAGAATATTGAACCACTGGAGAAGCACcgagacgaagaagaagaagaagaagaagaagacgaagagaAGAGCTACTCTTATGCCATGCAGATTACACTTTCCACCGTGACTGCCTTCTCCCTGCGAGCGGCGGCCAAGCTTGGCGTCTTCGACGTCCTCGACAAAGCCGGCGGCACGAGGCTCTCGGCCGAGGAGATCGCGTCTCGGCTCTCATTGGAGAACCCTGAGGCTCCTTCCATGCTCGATCGGATCCTCTTCCTTCTGGCAACTCACTCGGTGCTTCGGTGCTCCGTCGTCGGCGTTGGCGGCGATGAGGATGGACGGAACAAAGGAGGTTTCCGGCGGCTCTACGGCCTCGCTCCGGCGGCTAGATTCTTCGTAAGAGACGTTAATGGTGTGTCCTTGAGTCCGTTCATTGAGTTGCTTCAGCACAAAGTGTCACTTGATATTTGGCCATACATGAAAGATTCAATCTCGGAAGGTGGTTATGCATTCGAAAAACTTTCTGGCATAACCTTGTTCGAGTATTTGAGCAAGGACGCGGCGTACAACGCCATGTTTAACGAGGCAATGGTTAACCAAAGCACTATGGTTATGGCGAAGATTCTCGAAACCTACAAAGGCTTTGAGGGGATCAAGAAGCTTGTGGATGTTGGTGGCGGTTTAGGAGTGGAACACGCCATGGGGGATATGTTTGAAAGTGTGCCCAAAGGTGATGCCATCTTTATGAAGtGGATACTTCATAACTGGAGTGATGAACGGTGCGTGAAGCTTCTGAAGAATTGCTACGAATCCCTTCCTCATGATGGGAAAGTGATTGTGGCGGACGCCATTCTTCCCGTCGTGCCAGATACAAGTGCTTCTGTAAAAAGCACTTCCCAATTCGATGTTCTTATGATGAATTCTATCCCAACGGGTGGCAAAGAGCGAAATAAACAAGAGTTCATGGAATTGGCAACTTCAGCTGGATTTAGTGGTGTTCAATTTAAGTGCTTTGTTCGTAACTTATGGATTATGGAGTTCTTTAAGTAG 1089 0.4711 MSQFVEETETARLVVNGKEKNIEPLEKHRDEEEEEEEEDEEKSYSYAMQITLSTVTAFSLRAAAKLGVFDVLDKAGGTRLSAEEIASRLSLENPEAPSMLDRILFLLATHSVLRCSVVGVGGDEDGRNKGGFRRLYGLAPAARFFVRDVNGVSLSPFIELLQHKVSLDIWPYMKDSISEGGYAFEKLSGITLFEYLSKDAAYNAMFNEAMVNQSTMVMAKILETYKGFEGIKKLVDVGGGLGVEHAMGDMFESVPKGDAIFMKWILHNWSDERCVKLLKNCYESLPHDGKVIVADAILPVVPDTSASVKSTSQFDVLMMNSIPTGGKERNKQEFMELATSAGFSGVQFKCFVRNLWIMEFFK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0657 362 MobiDBLite consensus disorder prediction 12 28 - -
Sto1g0657 362 Gene3D - 25 145 IPR036388 -
Sto1g0657 362 MobiDBLite consensus disorder prediction 1 43 - -
Sto1g0657 362 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 35 244 - -
Sto1g0657 362 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 242 362 - -
Sto1g0657 362 SUPERFAMILY "Winged helix" DNA-binding domain 38 148 IPR036390 -
Sto1g0657 362 Coils Coil 15 42 - -
Sto1g0657 362 PANTHER O-METHYLTRANSFERASE 35 244 IPR016461 GO:0008168
Sto1g0657 362 PANTHER O-METHYLTRANSFERASE 242 362 IPR016461 GO:0008168
Sto1g0657 362 Pfam Dimerisation domain 59 108 IPR012967 GO:0046983
Sto1g0657 362 Pfam O-methyltransferase domain 243 344 IPR001077 GO:0008171
Sto1g0657 362 Pfam O-methyltransferase domain 170 242 IPR001077 GO:0008171
Sto1g0657 362 Gene3D Vaccinia Virus protein VP39 243 362 IPR029063 -
Sto1g0657 362 Gene3D Vaccinia Virus protein VP39 146 242 IPR029063 -
Sto1g0657 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 48 362 IPR016461 GO:0008168
Sto1g0657 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 360 IPR029063 -
Sto1g0657 362 PIRSF O-mtase 25 243 IPR016461 GO:0008168
Sto1g0657 362 PIRSF O-mtase 241 362 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0657 Sto-Chr1 6437308 6440932 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0657 40 362 Monolignol Biosynthesis Gene Families AT5G54160 43.662 2.55e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0657 K13066 - gmx:100803633 367.081