Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0654 ATGGCACATGAAGCAGCAGTGAACCAAACACATCATATTGACGACGAAGAAGAGAGCTTCGCCTACGCCATGCAAATTGCACTCTCCACCGTGACTGCCTTCTCCGTGCAAACGGCGACGGAGCTCGGCGTTTTCGATGTCATCGACGAAGCCGGCCCCGACGCCGAGCTCTCGGCCGGCGAGATCGCGTCTCGGCTTGCATGCAAGAACCCTGAGGCTCCTTCCATGCTCGACCGTCTCCTGTGCCTTCTCGCGTCTCACTCGGTGCTCCGTTGCTCCGCCGTGGCCGATGAGAGCCGAGGAGGGATCAACGGAGGGTTCCGGCGGCTTTACGGGCTCGCTCCGGTGGCTAGATTCTTCGTGAAAAATGCTGATGGTGTGTCGTTGGGCCCCTTTATCGCTTTGGCTCAAGATCATAAAGTGTCACTTGGTACCTGgGCGGTTTTGAAAGATGCAATATTAGAAGGTGGTATTGCCTTCGATAAGTTGTATGGCTCACCTATGTTTGAGTATACGAGTAAGGACAAGAGGTATGGTGACTTATTTAACCAAGCAATGATTAATCAAAGCACAATAGTTTTGAAGAAGATTCTGGAAACCTACAAAGGCTTTGAGGGAGTGGAACACGTGATGGGAGATATGTTTGAAAGTGTGCCCAAAGGAGATGCCATCTTTCTCAAGTGGATACTTCATAACTGGGGCGATGAACAGTGCGTGAAGCTTTTGAAGAACTGCTATGAAGCCCTTCCTGATGATGGAAAAGTGATTGTGGTAGAAGCTGTTCTTCCTATTGTGCCAAATACAAGTGCTTCTGTGAAAAGCACTTCTCAATTCGATGTTCTTATGATGGCTTTTATTCCGGCTGGGGGCAGAGAGCGAAGTGAACAAGAGTTCACAAATTTGGCAACATCAGCTGGATTCAGTGGCGTTCAATTTAAGTGCTTTGTTCGTAACTTATACGTTATGGAGTTCTTcaagtag 981 0.4852 MAHEAAVNQTHHIDDEEESFAYAMQIALSTVTAFSVQTATELGVFDVIDEAGPDAELSAGEIASRLACKNPEAPSMLDRLLCLLASHSVLRCSAVADESRGGINGGFRRLYGLAPVARFFVKNADGVSLGPFIALAQDHKVSLGTWAVLKDAILEGGIAFDKLYGSPMFEYTSKDKRYGDLFNQAMINQSTIVLKKILETYKGFEGVEHVMGDMFESVPKGDAIFLKWILHNWGDEQCVKLLKNCYEALPDDGKVIVVEAVLPIVPNTSASVKSTSQFDVLMMAFIPAGGRERSEQEFTNLATSAGFSGVQFKCFVRNLYVMEFFK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0654 326 Pfam Dimerisation domain 35 85 IPR012967 GO:0046983
Sto1g0654 326 Pfam O-methyltransferase domain 206 308 IPR001077 GO:0008171
Sto1g0654 326 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 205 326 - -
Sto1g0654 326 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 205 - -
Sto1g0654 326 PIRSF O-mtase 1 208 IPR016461 GO:0008168
Sto1g0654 326 PIRSF O-mtase 205 326 IPR016461 GO:0008168
Sto1g0654 326 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 204 IPR016461 GO:0008168
Sto1g0654 326 PANTHER O-METHYLTRANSFERASE 10 205 IPR016461 GO:0008168
Sto1g0654 326 PANTHER O-METHYLTRANSFERASE 205 326 IPR016461 GO:0008168
Sto1g0654 326 Gene3D Vaccinia Virus protein VP39 121 206 IPR029063 -
Sto1g0654 326 Gene3D Vaccinia Virus protein VP39 207 326 IPR029063 -
Sto1g0654 326 Gene3D - 2 120 IPR036388 -
Sto1g0654 326 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 205 326 IPR016461 GO:0008168
Sto1g0654 326 SUPERFAMILY "Winged helix" DNA-binding domain 15 123 IPR036390 -
Sto1g0654 326 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 323 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0654 Sto-Chr1 6392775 6398203 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0654 16 326 Monolignol Biosynthesis Gene Families AT5G54160 43.944 2.63e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0654 K13066 - zju:107423771 379.793