Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0652 ATGGCTGGCAACGACAGCGATGAGTGTAGGTTCAGGATGCCGGAGGAGTCAACTCTAAAGGAGTCGGCGTATCAGATCATAAACGACGAGCTTATGCTTGACGGCAACCCGAGGCTGAATCTAGCCTCTTTCATCCCCACTTGGATGGAGCCAGAGTGCGATAAGCTCATCATGTCCGCCATCAACAAGAACTATGTCGACATGGATGAGTGTCCTGTCACCACTAAACTCCAAGcatgtccttcttcttcatccatCTTGTTTAACGGATGCACTGCTGGAAGATTTTCAAGCGTTGGTTCTGGCCAGAAAATTACTATCTTGTTTCTGATAGTTATGGTACATGCAATTCTGCAGAAGCATTCTGCAGAATGCAAATGCATTCTGCAGCAGAAATTGCATTTTACAGAATTGCAATGCAGAAATGCATTTCTGCATTCTGCTGCACAAATGCATTCTGCAGaatgcatcatcatcatcatcatcatcatgtag 495 0.4081 MAGNDSDECRFRMPEESTLKESAYQIINDELMLDGNPRLNLASFIPTWMEPECDKLIMSAINKNYVDMDECPVTTKLQACPSSSSILFNGCTAGRFSSVGSGQKITILFLIVMVHAILQKHSAECKCILQQKLHFTELQCRNAFLHSAAQMHSAECIIIIIIIM 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0652 164 PANTHER GLUTAMATE DECARBOXYLASE 9 102 - -
Sto1g0652 164 Pfam Pyridoxal-dependent decarboxylase conserved domain 18 79 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto1g0652 164 PANTHER GLUTAMATE DECARBOXYLASE 9 102 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sto1g0652 164 Gene3D - 4 45 - -
Sto1g0652 164 SUPERFAMILY PLP-dependent transferases 6 78 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0652 Sto-Chr1 6378503 6385268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0652 10 107 Calmodulin-binding Proteins AT5G17330 66.346 1.92e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0652 K01580 - thj:104827229 132.494