Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0648 ATGGCACATGAAACAGCAGTGAACCAAACACATCATGacgaagatgaagaagagagcTACTCCTCCGCCAAGCAAATTGCACTCTCCACCGTCACTGCCTTCTCCGTGCAAACGGTGGCGGAGCTCGGCGTTTTCGACGTCATCGACAAAGCCGGCCCCGACGCCGAGCTCTCGGCCGACGAGATCGCGTCTCGGCTCGCGTGCAAGAACCCTGAGGCTCCTTCCATGCTCGAGCGTCTCCTGTGCCTTCTCGCGTCTCACTCGGTGCTCCGTTGCACCGCCTTGGCCGATGACAGCCGAGGAGGGATCATCGGAGGGTTCCGGCGACATTACGGGCTCGCTCCGGTGGCTAGATTCTTCGTGAAAAATGCTGATGGTGTGTCGTTGGGCCCCTCTATGGCTTTGGCTCAAGATAAAGTGTCACTTGATAGCTGgACGGCTTTGAAAGATGCAATATTAGAAGGTGGTATTGCCTTCGATAAGTTGAATGGCTCACCTATGTTTGAGTATACGAGTAAGGACAAGAGGTATGGTGACTTATTTAATCAAGCAATGATTAATCAAAGCACAATAGTTATGAAGAAGATTCTGGAAACCTACAAAGGCTTTGAGGGAGTGGAACACGTGATGGGAGATATGTTTGAAAGTGTACCCAAAGGAGATGCCATCTTTATCAAGTGGATACTTCATAACTGGGGTGATGAAGAGTGCGTGAAGCTTTTGAAGAACTGCTATGAAGCCCTTCCTGATGATGGAAAAGTGATTGTGGTAGAAGCTGTTCTTCCTATTGTGCCAAATACAAGTGCTTCTGTGAAAAGCACTTCTCAATTCGATGTTCTTACGATGGCTTTTATTTCAGCTGGAGGCAGAGAGCGAAGTGAACAAGAGTTTACAAATCTGGCAACATCAGCTGGATTCAGTGGCGTTCAATTTAAGTGCTTTGTTTGTAACTTACACGTTATGGAGTTCTTCAAGTAg 978 0.4703 MAHETAVNQTHHDEDEEESYSSAKQIALSTVTAFSVQTVAELGVFDVIDKAGPDAELSADEIASRLACKNPEAPSMLERLLCLLASHSVLRCTALADDSRGGIIGGFRRHYGLAPVARFFVKNADGVSLGPSMALAQDKVSLDSWTALKDAILEGGIAFDKLNGSPMFEYTSKDKRYGDLFNQAMINQSTIVMKKILETYKGFEGVEHVMGDMFESVPKGDAIFIKWILHNWGDEECVKLLKNCYEALPDDGKVIVVEAVLPIVPNTSASVKSTSQFDVLTMAFISAGGRERSEQEFTNLATSAGFSGVQFKCFVCNLHVMEFFK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0648 325 Gene3D Vaccinia Virus protein VP39 207 325 IPR029063 -
Sto1g0648 325 Gene3D Vaccinia Virus protein VP39 121 206 IPR029063 -
Sto1g0648 325 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 322 IPR029063 -
Sto1g0648 325 Gene3D - 2 120 IPR036388 -
Sto1g0648 325 MobiDBLite consensus disorder prediction 1 21 - -
Sto1g0648 325 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 325 IPR016461 GO:0008168
Sto1g0648 325 PANTHER O-METHYLTRANSFERASE 11 205 IPR016461 GO:0008168
Sto1g0648 325 PANTHER O-METHYLTRANSFERASE 204 325 IPR016461 GO:0008168
Sto1g0648 325 PIRSF O-mtase 1 207 IPR016461 GO:0008168
Sto1g0648 325 PIRSF O-mtase 203 325 IPR016461 GO:0008168
Sto1g0648 325 SUPERFAMILY "Winged helix" DNA-binding domain 14 123 IPR036390 -
Sto1g0648 325 Pfam O-methyltransferase domain 204 307 IPR001077 GO:0008171
Sto1g0648 325 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 205 - -
Sto1g0648 325 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 204 325 - -
Sto1g0648 325 Pfam Dimerisation domain 37 85 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0648 Sto-Chr1 6348729 6356220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0648 4 325 Monolignol Biosynthesis Gene Families AT5G54160 42.391 3.12e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0648 K13066 - zju:107423771 369.007