Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0645 ATGGCACATGTAGAGGAAACCCAAGCCATTCTTCTCAATGGCAAGAACAAGAAGAATGAAGAACCATCACCATTCGAAAAAAAGATTGATCACGAtaaggaggaggaagaaagctTCTCTTACGCAATGCAAATTGCGCTCTCCACCGTCGCCTCCTTCGCCATCCAGACGGCGACGGAGCTCGGCGTCTTCGACATCATCGACAAGGCCGGCGGCCTCGACGCCAAGCTCTCTGCCGAGGAGATCGCGTCCCAGCTCTCTTGCAAGAATCCCGAGGCGCCGTCCATGCTCGACCGGCTCCTCTGCCTCCTGGCCTCCCACGCCATGCTCCGGTGCTCCGTCGTCGCCGCCGACGACGACGGCCGGAAAGGAGGATTCCGGCGGCTGTACGGCCTCGCTCCGGTGGCTAAATTCTTTGTGAAAGATGCGGATGGCGTGTCCTTGGGCCCTTTACAAGCATTGGTTCAACACAAAGTGGCACTTGATACCTGGCCCTatttgaaagatgcaattttggAAGGTGGTGTGGCATTCGATAAGTTGTTCGGGATGCCGGTGTTCGAGTACTACGGGAAGGACGCGAGCTATGGCGCGTTGTTTAACACCGCCATGCTCAACGAAAGCACTATAGCTATGAGGAAGATTCTAGAAAACTACGATGGCTTTGAGGGTATCAAGACACTGGTTGATGTTGGTGGCGGTTTAGGCTTAACTCTCAAAGCCATCACTTCCAAATACCCTCAGATTCAGGGCATCAATTTCGACTTGCCTCATGTCATTCGACAAGCAACTTCTTATCCTGGAGTGGAACATGTGATGGGAGATATGTTTGAAAGTGTGCCCAAAGGAGATGCCATCTTTCTCAAGTGGATTCTTCATAACTGGGGCGACGAACGGTGCTTGAAACTTCTGAAGAACTGCCACGAATCGCTTCCCGACAACGGAAAAGTGATTGTGGTGGACGCACTTCTCCCCGTCGTGCCGGACACAAGTGCTTCTGTGAAAAGCTCTACTCAGTTTGACGTCATGATGATGACTTATATTCCAGCTGGTGGGAAGGAGAGAAGTGAACAAGAGTTTATAGATTTGGCAACATCCACTGGCTTCACTGGCGTTAGATTTAAGTGCTTTGTTCGCAACTTGTGCGTCATGGAGTTTTACAAGTag 1167 0.497 MAHVEETQAILLNGKNKKNEEPSPFEKKIDHDKEEEESFSYAMQIALSTVASFAIQTATELGVFDIIDKAGGLDAKLSAEEIASQLSCKNPEAPSMLDRLLCLLASHAMLRCSVVAADDDGRKGGFRRLYGLAPVAKFFVKDADGVSLGPLQALVQHKVALDTWPYLKDAILEGGVAFDKLFGMPVFEYYGKDASYGALFNTAMLNESTIAMRKILENYDGFEGIKTLVDVGGGLGLTLKAITSKYPQIQGINFDLPHVIRQATSYPGVEHVMGDMFESVPKGDAIFLKWILHNWGDERCLKLLKNCHESLPDNGKVIVVDALLPVVPDTSASVKSSTQFDVMMMTYIPAGGKERSEQEFIDLATSTGFTGVRFKCFVRNLCVMEFYK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0645 388 Gene3D Vaccinia Virus protein VP39 140 388 IPR029063 -
Sto1g0645 388 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 29 388 - -
Sto1g0645 388 Pfam O-methyltransferase domain 164 369 IPR001077 GO:0008171
Sto1g0645 388 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 386 IPR029063 -
Sto1g0645 388 PIRSF O-mtase 22 388 IPR016461 GO:0008168
Sto1g0645 388 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 388 IPR016461 GO:0008168
Sto1g0645 388 SUPERFAMILY "Winged helix" DNA-binding domain 34 143 IPR036390 -
Sto1g0645 388 MobiDBLite consensus disorder prediction 1 31 - -
Sto1g0645 388 Gene3D - 21 139 IPR036388 -
Sto1g0645 388 Pfam Dimerisation domain 54 105 IPR012967 GO:0046983
Sto1g0645 388 PANTHER O-METHYLTRANSFERASE 29 388 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0645 Sto-Chr1 6325278 6331763 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0645 35 388 Monolignol Biosynthesis Gene Families AT5G54160 51.412 2.79e-130 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0645 K13066 - zju:107423771 453.751