Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0642 ATGGATTTCGGAGGCTCCCGCTTGATCGGAGACTACATACTGGGGCCGCAAATCGGGTCGGGCTCTTTCGCGGTGGTGTGGCACTCACGGCATCGTCACTCGGGTTTGGAGGTTGCTGTTAAGGAGATTGACATGAAAAAGCTTAGCCCTAAAGTCAGTGAGAGTCTGCTCAAAGAGATTTCTATTCTCAGCACTATCAATCACCCGAATATTATTCGGTTATTCGAAGCAATTCAGACCAATGATAGGATTTACCTTATATTGGAGTATTGTAACGGTGGTGATCTCGCTACTTACATTCATCGATGCGGAAAAGTTTCAGAATCCGTTGCTTGCCACTTTATGAGGCACTTAGCTGCGGGGTTGCAGGTACTTCAAGAAAAGAACCTCATTCACAGAGATTTAAAACCACAGAACTTGCTATTATCTACTATTGGAGGTACACTACTTCTGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCACACCCCAAGGGTTGGCAGACACACTGTGTGGCTCGCCTTTGTACATGGCTCCGGAGATAATTCAAAATCAGCAGTATGATGCTAGGGCTGACTTATGGAGTGTTGGAGCAATATTGTTCCAGCTAGTGACTGGGAGGCCACCATTCGAAGGAAATAATCAATTGCAGCTTTTTCAGAACATTTTGCAATCCACCGAACTGAAGTTTCCACAAGAGGCTATAAATAAGTTACATCCTGACTGCTTGGATCTTTGCAGAAACCTTTTACGTCAAAACCCAGATGAGCGATTAACATTCAAAGAATTCTTCAATCACAATTTCTTACGGGAACCCAGGTCAATCGTGAATGTTGAGCAGTCTTCTCTACTCCCACCAGAAAGATTAATGGTTCAGCAATATGGTAGTATCTCTACCTCTGACAAGATGCCTCGGTTGCATTCTGGGCATCATTTTGAGATATCTGCATATGATCCTGTGGTAATCAGTTTGCCTGTCAAAGAGACTATGCTGTTACAAAGAAAGGATACTGGAAGTACAGCTGGCACTAAGAAAGTTCAGGGGAGAATTTCAACTACTTCATGTGATAAGCAGGGGAATTTTGTTGGTACGGGTTCTCATTTGTCAAACCAGCCTCGAGttccTCGTTTGATGGAATCCATTGAGAAAGGTTATGTCCTAGTCAATCGTCATTTTGCATCAATGGAGGGTTTCTCTGATTACTTTGAGGCACCCATGAAAGAAAATCTCACCAGCAGGCTTTCTATCTGTCCTCCAAAGAGGGTTGAGCCTGAAGTTGAAGTTGGAAAAAAAATGACAGATTCAGCCTCTTGCTATCTTGACGGATCAGAAAAGTTGAAAAGTGATGATCTTGAGGCATCCACTTTGTTTCCTGTCCTGAGTAAAGTGCAGGGAGTATCAATGCTGCAGCCATCGAGTAGGTTAGAGTTGTTGCATCAATATGTGCAGATCCTCAAAGAACTTTCACAAGAAAAATATAATGCAGGACTGTATCTAGAATCATTTTCAGTTGAGCTGGTGGTTTTGGCTATATGGAAGAAAGCTCTAGAAGTTTGTAATTCTTGGCTGGCTTCTATCAGTGAGGGCAAGATTCCTGAAAGCACTTCAGAGAAAGAATCCACATTTTCCTGCAGAGATGTATGCACATCAAAGACCATGGAACAGAAAACAGATTTTAGTGAACCTTCATCTGTGTCCTTGTGGGCCAAGCAAGGGTTTATATTTGCCGTGGATCATGCAGAGAAACTATCGTGCCATATTCAAAGTGTGGATGGTGCTGCTGAGATGCCGGATGCAATGGAGATCATATTTCAAAAAGCTCTATCAGTTGGCAGAAGTGGTGCTGTAGATGAGTATATGGAGAACAAAGGTAGAGCAGCTGAATCTTACTCAAAAGCAATGCTGCTACTTTCATTTATTGTGGGAGAAGCAGTGCAGCTCCCACTGAAcccaccattttcactaactcCTGCTAATAAGAAGAGAATTTTGCAGTATATTCTTTACCTGCAGTCGCATCAACTTCAGTCTTCTTCATCAGAGCCTTCTTCTAAGGCATCTCGCATTCTTTTGTAA 2079 0.4223 MDFGGSRLIGDYILGPQIGSGSFAVVWHSRHRHSGLEVAVKEIDMKKLSPKVSESLLKEISILSTINHPNIIRLFEAIQTNDRIYLILEYCNGGDLATYIHRCGKVSESVACHFMRHLAAGLQVLQEKNLIHRDLKPQNLLLSTIGGTLLLKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNQQYDARADLWSVGAILFQLVTGRPPFEGNNQLQLFQNILQSTELKFPQEAINKLHPDCLDLCRNLLRQNPDERLTFKEFFNHNFLREPRSIVNVEQSSLLPPERLMVQQYGSISTSDKMPRLHSGHHFEISAYDPVVISLPVKETMLLQRKDTGSTAGTKKVQGRISTTSCDKQGNFVGTGSHLSNQPRVPRLMESIEKGYVLVNRHFASMEGFSDYFEAPMKENLTSRLSICPPKRVEPEVEVGKKMTDSASCYLDGSEKLKSDDLEASTLFPVLSKVQGVSMLQPSSRLELLHQYVQILKELSQEKYNAGLYLESFSVELVVLAIWKKALEVCNSWLASISEGKIPESTSEKESTFSCRDVCTSKTMEQKTDFSEPSSVSLWAKQGFIFAVDHAEKLSCHIQSVDGAAEMPDAMEIIFQKALSVGRSGAVDEYMENKGRAAESYSKAMLLLSFIVGEAVQLPLNPPFSLTPANKKRILQYILYLQSHQLQSSSSEPSSKASRILL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0642 692 Gene3D Transferase(Phosphotransferase) domain 1 5 324 - -
Sto1g0642 692 PANTHER BNAC06G18300D PROTEIN 459 668 - -
Sto1g0642 692 PANTHER BNAC06G18300D PROTEIN 6 299 - -
Sto1g0642 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Sto1g0642 692 SUPERFAMILY Protein kinase-like (PK-like) 8 305 IPR011009 -
Sto1g0642 692 CDD STKc_ATG1_ULK_like 18 269 - -
Sto1g0642 692 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 459 668 IPR045269 GO:0004674|GO:0006914
Sto1g0642 692 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 299 IPR045269 GO:0004674|GO:0006914
Sto1g0642 692 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Sto1g0642 692 ProSiteProfiles Protein kinase domain profile. 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0642 692 SMART serkin_6 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0642 692 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0642 Sto-Chr1 6288663 6295078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0642 8 263 CBL-interacting serine-threonine protein kinases AT2G30360 37.405 8.62e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Sto1g0642 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0642 - K08269 gmx:100779262 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0642 1 6288663 6295078 Sto1g0642 1 6288663 6295078 ECH