Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0623 ATGGCGAACCCACCTTCAATACTCGAATACATGCCCGTGGGATTCCGATTCCGTCCAACCGATGAAGAACTCGTGGGTCACTACATGAAGCACAAATTGAACGGTGATCATTTCCTTTCCCAGATTATCCCTGAGATTGACCTTTGCAAGCACGAGCCCTGGGATTTACCagATTTTTCGGTGATGAAGTCGGATGATCCAGAGTGGTTTTTCTTCAGTCCTCCGGATTTCAAGTACTCTAACAGTAATAGGGCGAACAGGGCAACGGAATGTGGCTTCTGGAAGGCCACTGGTAAAGACAGGAAGATTAAGGTTCGAGGCACCGATAATGTTATTGGGATGAAGAAGACTCTGGTTTTCTACCGAGGTCGTGTCCCTAATGGGGTCAAGACCAACTGGGTGATCCATGAGTATCACGCAGTTACATTTCCTGTTCGGCAGAGGACCTTTGCTCTATGCCGGTTGATGAAGAAACCGGAGAAAAAAACAGAGGAGAGAACTGCTGAAGGTGAGCCGAGTAGCCGTATGGCTTCGGACTCTGAAAGTCAACCAAGTTCAGGTCGAATTCCAGATGTATGTCCTTTGCCGGCGTCAGAGACTTTGGAAGCGATCTTTCCGATGCCACCGCAAGCAAACGAACGTGATCTGCCCTCTCCATTTGCTGCCATTGATCACGATTTACCTTCCCAAGCTTATTTCTTGCCCAATTTTGGGAATGAGAACATTGGTGGTGCACCCTTCGAAACTACTGAAGAGGAAGAGGAGTTTGTGAGTTCATTGTTTGTGAATGATGACGTGTTCTCCAGAGAGGAAACAAGACATGATGCTTTTGTTGTCAATGACTCCACTCCCTCAGAGTCATTGAAAATGGTGTATTACGAAAGCAGTGACACGGACGCCGAAGTGGTCTCTGTAAGGATTTTTGAAAGTGAGCGAAATGTTTCAATGAACTGTTTTTGGGAAAGAGGATTCTATAAAGTAGGAGACACAGATATTTTAAGGGTGTCTAATAAAAATGCTGGTTCAAGTGAATATGGGCTAAGGAGGACAATGGTTGTTAAGTCCTCATCATCACATGCTGGTGCTAAACATATTGGCACTTCTGAACTCTCTTCTAACCAAGAAGCAAGCATTGAGAAAAGGAGCATATCCATATCCTTTCAAGATGATTTCCCGGGTGTCGACACTTCCTCCGGCGACTCCACCCCGGTTAAACCTCGTATCGAAATTTCTAGCTCTCCTTCCACTCTGAAAGCAAGTAGAGTTCAATATCAACCAAGATCCGCGAACTCAGTGTCACAGAGAACCGGGGCAAGAAGATCTCAAACACCGAGGAAGGTTTCGACCAAAGCTGCCTCACGTCACCACGAGGCTCAGAAGGACATGCTCAAGGACACCGTTTCAAGAAACTCTTCGGAATCCCCAAGCAATCGATCTTTCATTCACATGGAGACACCTGCATTGAGCCAAAACCTTAGTCCACCGTCGCTAAATCTGATAGACCTAATAGAACAACTAGCTAAAACAGGCTGTATTTACAGTACATATGTAGCAAGTAGCAACAAAATGGATTCGGATCCTCTGAATTGCATATCTCGTATTGTGTACTGTGTAGAAGATACTGATTTGAAGTGCAAGAAGGAAGCCATCATCAAATCTTGA 1662 0.4531 MANPPSILEYMPVGFRFRPTDEELVGHYMKHKLNGDHFLSQIIPEIDLCKHEPWDLPDFSVMKSDDPEWFFFSPPDFKYSNSNRANRATECGFWKATGKDRKIKVRGTDNVIGMKKTLVFYRGRVPNGVKTNWVIHEYHAVTFPVRQRTFALCRLMKKPEKKTEERTAEGEPSSRMASDSESQPSSGRIPDVCPLPASETLEAIFPMPPQANERDLPSPFAAIDHDLPSQAYFLPNFGNENIGGAPFETTEEEEEFVSSLFVNDDVFSREETRHDAFVVNDSTPSESLKMVYYESSDTDAEVVSVRIFESERNVSMNCFWERGFYKVGDTDILRVSNKNAGSSEYGLRRTMVVKSSSSHAGAKHIGTSELSSNQEASIEKRSISISFQDDFPGVDTSSGDSTPVKPRIEISSSPSTLKASRVQYQPRSANSVSQRTGARRSQTPRKVSTKAASRHHEAQKDMLKDTVSRNSSESPSNRSFIHMETPALSQNLSPPSLNLIDLIEQLAKTGCIYSTYVASSNKMDSDPLNCISRIVYCVEDTDLKCKKEAIIKS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0623 553 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Sto1g0623 553 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Sto1g0623 553 MobiDBLite consensus disorder prediction 173 187 - -
Sto1g0623 553 MobiDBLite consensus disorder prediction 357 448 - -
Sto1g0623 553 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Sto1g0623 553 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 8 469 - -
Sto1g0623 553 MobiDBLite consensus disorder prediction 450 467 - -
Sto1g0623 553 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 469 - -
Sto1g0623 553 MobiDBLite consensus disorder prediction 159 193 - -
Sto1g0623 553 MobiDBLite consensus disorder prediction 357 479 - -
Sto1g0623 553 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0623 Sto-Chr1 6105737 6109376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0623 8 163 NAC Transcription Factor Family AT4G35580 57.764 2.56e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto1g0623 NAM 4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0623 - - gsj:114390609 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0623 1 6105737 6109376 Sto1g0623 1 6105737 6109376 ECH