Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0618 ATGCCTCTAGAGGAGACAACGGGGTTGGATTTAATGGTTCTTAAGGTATGGAAAAGTTTTGAAGCTGAGAATGTTGGTGTCATTGGTTTATATGGCATGGGTGGGGTAGGGAAAACTACTCTTTTGAAAAAATTCAACAATCAACTTGTGAGTAGAAGACAAGATTTTGACTTTGTGATGTGGATTGTAGTATCCAAAGAGCCTAACTTGGATAGTATTATGGACAACATCAGAAAAAAGATAGGGATCGAAGACAATGTTTGGAGTCTTTGTAGTGATCGAGATGAAAAGGCTAAAAGGATTTATAATGttctaaaagaaaagaaatttgttTTGTTATTGGATGATATTTGGGAAAGATTGGAGTTAAAAATGGTGGGAATTCCACATCCTAAGGATATCAATTTTCAATCGAAAGTGTTATTCACAACACGATCCGAGGATGTGTGTGCAAAAATGCAAGCTCAAAAAACATTCAGAGTAGAAGTTTTGCCGAAGAAAGAAGCATTTGAGTTGTTTTGCAGTAAAGTTGGGGAAGAAACTCTAAATTCACACCCTGGTATTCCAAAACTAGCAGAGGAGATGGCTGCAGAATGTAAAGGACTACCACTTGCACTAAATGTAGTAGGAAGTGCCATGGCCGGTGTGAACAAGTTTGAAGAATGGGAACATTACAAAAACAGCTTGAGGGATTCTCCATGGATAGCTTCAGATTATGAGAAGAATGTGTTCTCTATCCTCAAGTTTAGCTTTGACAAGCTGCCAGATGAAACGCATAGAAATTGTTTCTTGTATTGTGCATTATACCCGGAAGATCATGAGATTCTGGTTCTTGATCTCATTGATAAATGGATGGGAGAGGGATTTCTTGGGGAAGATACGACAAGGAGTATATATGCTATGCGTAATCATGGTGAGTCTGTTATTCAAAAGTTAAAACTTTCATGCTTGTTAGAAAGTGTTGAAGATGATCTTTTTCTGAGTCGTACTGTAAAGATGCATGATGTGGTTCGAGACATGACACTTTGGTTAGCGCGTGATCAAGATAAAAACAAGAGAAAGATTCTAGTACAAAGAGATGTGTTGTCTGTATCCCAAGATGACGTTGAAACATGGAGAATTGTTGAGAAGATTTCAATAAGAGATTGTGATGAATTTCGTGTACCAACTGTGCCTTATCCAAACCTCACAACCTTTATAGTCAACTCATGTTCAAATATCAATAATATCCGATATATGAGAAGATTAAAAGTCTTGGATTTGTCACCTGCATGGGATTCACCAATGGAGATTCCAATAGAGATTGGCGATTTAGCTCTTTTGGAATATTTAATTGGATTTAATATTTTGGCTTCAGAGTTTCCCATGGGGTTGAAGAAGTTGAAAAACTTAAAGTTTTTAAGTTTGAATGTAAGAAAAGGTGATGCAAGTATTATGTCAGAAGTGATATCAAGTCTAGAACAGTTAAGAGTGTTCAGATTTTATAGTTTTACTAGAGGTACAAGTTGGGGCAATGAGAGAGAATTCCTAGAGAAGCTCGAGTGCCTACCAAATCTGGAAGAACTTGTCCTAACAATTTACACTGAGAATGGCCTGAACAAGTTACTCGAGTCTACCAAGTTGCAGAGTTGTAtgcattttcttcatctttttgaCGTGGACGACTTCCTAATTCACTTGCCATCATTATTCGCATCCATGTCAAAGATGGAGCACTTGCTATTCATTTCTTTCATACAAGTGAGATTTGTCCAAGATTCTTCTGTTCATAACACTTGTTGTTTGAGGAAGCTTCGAAATGTGGTTCTGTCCGCCTGCTCTTCAATAGTTGATTTGACATGGCTCAAGTATGCTCCACTTCTCCAATCTGTTTATATACATAACTGTGAGTCAGTGGAAGAAGTGATAAAGGGATCAGGAATAGAAGGTGATGTATTCTCATCTCTTGTAGAGCTGAAATTGTTGTCTCTCCCAAAGCTTAAGAGCATCCATAACACACCCTTGACTTTTCCTTCCTTAAGATCACTTGAGATAAGTGGTTGTCCAACTCTGAAAATATTACCCTTTGATTCCAACTTTGCCAAACACAAGTTGAAGGAAATTAAAGGGAAACAAGAATGGTGGGACAATTTGGAATGGGAGGACCAAGCTATAAAGCTTAAATTCCagtcaaaatttcaaatcataCGAGAGAATCTAAAGTCATTGGAAGATAAATGGGAAGATCTTTTAAGTATGAAACAAGATTTGATGGCAAGAATTGATGAAGCTGAGGACACAGGAAATATGCATAGGACACAAGAAATGGATAGATGGATAAACCAAGTTGAATTCCACCAAGAGAATTGCAAGTCGAGTTACAAGTTAGGAAAGAAAGTTGCTAAGATTCTCAAGAATGTTGATGAACTAGCAACCAAAGGTCAAAGGTTTAGTAAGCTTGGTGAAGTTGCTCACAAAATACCAAACAGGCTAGCAATAGAGATGCCTCCTGATGAGACAGTTGGGCTGGATTTGATGTTTACTAAGGTATGGGATAGCATTGAAGCAGAAACTGTTGGAGTGATTGGTTTATATGGGATGGGAGGGGTGGGAAAGACCAcccttttgaaaaaaattaataatgaactTGGGAAGAGAATGCTGGACTTTAATCTTGTGATGTGGATTGTAGTATCTAAAGAACCAAATTTAGATAGTATTATGGAAAACATCAGAAAGCAGATAGGAATTGAAGATAACATTTGGAATCGTTGTAGCAATCATGATGAAAAAGTTggaaagatttatcattccttGAAACAGAAGAAATTTGTCCTGTTATTGGATGATATATGGGAGAGCTTAGAGTTGAAAATGGTAGGAGTTCCACATCCAAAGGATAATAATTTTCAATCCAAAGTGTTATTCACAACACGGTCTAAAGATGTGTGTGCAAAAATGCAAGCTCAAAGTACATTCCAAGTAGAAATTTTGACGGAGAAAGAATCATTAGAGTTATTCTTCATGAAAGTTGGTGAAGAAACTCTCAAGTCTCATCCTAATATTCCAAAGCTAGCGAAAGAGATGGTTGTGGAATGTAAAGGGTTACCACTTGCACTTATTGTAGTGGGAAGTGCCATGGCTGGTGTGAAGAGTGTGGAAGCATGGGAGTACTCaagaaacaaattaacaagTTCTTCATGGACAGCTCCAAATTTAGAAACAAAAGTATTTTCTATTCTTAAGTTTAGCTTCGACAAACTTTTGGACGAAGCACATAGAAATTGTTTCTTGTATTGTGCATTATATCCTGAAGATTATGAGATTAATGTTTTTGATCTCATTTATAAATGGATAGGGGAGGGATTTCTTAGTCAAGACACGGGGGAAAGTGTTCAAGATATGCGACTTCACGGTGAGTCTGTGATTCAAAAGTTAAAGCTTTCATGCTTGCTAGAAAGTGTTGAAGATGATCTCTTTTTAAGTCGTAAAGTTAAAATGCATGATGTGATTAGAGACATGGCACTATGGATACTGCGTGGTCAAGATAAAACCAAAAGAAAGATTCTGGTACAAGAAGGTGCATCAAGAGTCTCCCCAAATGATATTCAAATGTGGAAAACTATTGAAAGGATTTCAATCATAGACTACGATGAATTGCATGTACCTGCCGTGGCTTGCCCAAATCTCACAACCATTACTTTTGCAATGAAAAAACTTGGTGGTCCAAAAACTCTAGATTTGTCAAATATCCAATACATGAGTAGATTAAAAGTCTTGGATGTGTCAAGTAGTCATCCACAAAAGATAATAAAGCTGCCTGCAAAATTTGGTGATTTAGTACATTTGGAATATCTTTCTTTGATGGGAGATATGTCTGTGATTCCCACCgagttgaagaagttgagaaaCTTGAAGTATATTGCTTTATATAAAAGCAGTGATGATGTTGTAAGCATTCTATTGGAAGTGGTATCAAATCTTGAAGAGTTAAGAGTGTTGAGATTTAACACTTCAgccaaaaagaataaagaagagagaaaaattgcTTGA 4032 0.3562 MPLEETTGLDLMVLKVWKSFEAENVGVIGLYGMGGVGKTTLLKKFNNQLVSRRQDFDFVMWIVVSKEPNLDSIMDNIRKKIGIEDNVWSLCSDRDEKAKRIYNVLKEKKFVLLLDDIWERLELKMVGIPHPKDINFQSKVLFTTRSEDVCAKMQAQKTFRVEVLPKKEAFELFCSKVGEETLNSHPGIPKLAEEMAAECKGLPLALNVVGSAMAGVNKFEEWEHYKNSLRDSPWIASDYEKNVFSILKFSFDKLPDETHRNCFLYCALYPEDHEILVLDLIDKWMGEGFLGEDTTRSIYAMRNHGESVIQKLKLSCLLESVEDDLFLSRTVKMHDVVRDMTLWLARDQDKNKRKILVQRDVLSVSQDDVETWRIVEKISIRDCDEFRVPTVPYPNLTTFIVNSCSNINNIRYMRRLKVLDLSPAWDSPMEIPIEIGDLALLEYLIGFNILASEFPMGLKKLKNLKFLSLNVRKGDASIMSEVISSLEQLRVFRFYSFTRGTSWGNEREFLEKLECLPNLEELVLTIYTENGLNKLLESTKLQSCMHFLHLFDVDDFLIHLPSLFASMSKMEHLLFISFIQVRFVQDSSVHNTCCLRKLRNVVLSACSSIVDLTWLKYAPLLQSVYIHNCESVEEVIKGSGIEGDVFSSLVELKLLSLPKLKSIHNTPLTFPSLRSLEISGCPTLKILPFDSNFAKHKLKEIKGKQEWWDNLEWEDQAIKLKFQSKFQIIRENLKSLEDKWEDLLSMKQDLMARIDEAEDTGNMHRTQEMDRWINQVEFHQENCKSSYKLGKKVAKILKNVDELATKGQRFSKLGEVAHKIPNRLAIEMPPDETVGLDLMFTKVWDSIEAETVGVIGLYGMGGVGKTTLLKKINNELGKRMLDFNLVMWIVVSKEPNLDSIMENIRKQIGIEDNIWNRCSNHDEKVGKIYHSLKQKKFVLLLDDIWESLELKMVGVPHPKDNNFQSKVLFTTRSKDVCAKMQAQSTFQVEILTEKESLELFFMKVGEETLKSHPNIPKLAKEMVVECKGLPLALIVVGSAMAGVKSVEAWEYSRNKLTSSSWTAPNLETKVFSILKFSFDKLLDEAHRNCFLYCALYPEDYEINVFDLIYKWIGEGFLSQDTGESVQDMRLHGESVIQKLKLSCLLESVEDDLFLSRKVKMHDVIRDMALWILRGQDKTKRKILVQEGASRVSPNDIQMWKTIERISIIDYDELHVPAVACPNLTTITFAMKKLGGPKTLDLSNIQYMSRLKVLDVSSSHPQKIIKLPAKFGDLVHLEYLSLMGDMSVIPTELKKLRNLKYIALYKSSDDVVSILLEVVSNLEELRVLRFNTSAKKNKEERKIA 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0618 1343 Gene3D Ribonuclease Inhibitor 1176 1337 IPR032675 -
Sto1g0618 1343 Gene3D Ribonuclease Inhibitor 347 742 IPR032675 -
Sto1g0618 1343 SMART AAA_5 24 168 IPR003593 -
Sto1g0618 1343 SMART AAA_5 851 996 IPR003593 -
Sto1g0618 1343 Coils Coil 733 753 - -
Sto1g0618 1343 PANTHER DISEASE RESISTANCE PROTEIN RP 507 718 IPR044974 GO:0006952
Sto1g0618 1343 PANTHER DISEASE RESISTANCE PROTEIN RP 727 1329 IPR044974 GO:0006952
Sto1g0618 1343 PANTHER DISEASE RESISTANCE PROTEIN RP 12 499 IPR044974 GO:0006952
Sto1g0618 1343 Gene3D - 163 250 IPR042197 -
Sto1g0618 1343 Gene3D - 990 1077 IPR042197 -
Sto1g0618 1343 SUPERFAMILY L domain-like 1159 1326 - -
Sto1g0618 1343 SUPERFAMILY L domain-like 320 700 - -
Sto1g0618 1343 Gene3D - 251 342 IPR036388 -
Sto1g0618 1343 Gene3D - 1078 1169 IPR036388 -
Sto1g0618 1343 Pfam NB-ARC domain 12 252 IPR002182 GO:0043531
Sto1g0618 1343 Pfam NB-ARC domain 840 1079 IPR002182 GO:0043531
Sto1g0618 1343 PANTHER OS12G0491200 PROTEIN 12 499 - -
Sto1g0618 1343 PANTHER OS12G0491200 PROTEIN 727 1329 - -
Sto1g0618 1343 PANTHER OS12G0491200 PROTEIN 507 718 - -
Sto1g0618 1343 Gene3D - 10 161 IPR027417 -
Sto1g0618 1343 Gene3D - 825 988 IPR027417 -
Sto1g0618 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 817 1093 IPR027417 -
Sto1g0618 1343 PRINTS Disease resistance protein signature 27 42 - -
Sto1g0618 1343 PRINTS Disease resistance protein signature 104 118 - -
Sto1g0618 1343 PRINTS Disease resistance protein signature 199 213 - -
Sto1g0618 1343 PRINTS Disease resistance protein signature 668 684 - -
Sto1g0618 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 266 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0618 Sto-Chr1 5937999 5952842 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0618 24 290 WRKY Transcription Factor Family AT5G45050 23.381 2.76e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0618 - K13459 mtr:MTR_4g091380 597.43