Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0615 ATGAAGTCAGTAATAGTGGCATTATCGATTTTGGCGGCGGCGTTCGTGGCAGCGACGGCGGCCAGTAGTCGAATGAATAAGTACATTATGTGGAGAGACTTGGAGGTGGGTGAGATTGAAGGTAAATCAAATTGGGGTGATGGAGTTATTATAGTTCGTCAGGATGGATTTGGAAATTCACTACTGTTCAAGGAGCTGTGGACTTGGGAAAAAGTATACGTGCCGAGAGACAAGCCATATATTTCATTCATAGGAAAAGAAGGTGAAATAGAGAATGAAATACCTATCATTACAAATAATACCAAAGCTTCGGACATAGATTCAAATGGACAAAAGCTTGGCACACATAATACATACACAAATAGTGCAGTTCCAGATGGAAAAGGAGATCAAGGTGTGGCACTGAGGATGGATGGTGATAAAGCTGTGTTATACAGAGTGAGGTTGTTGGGGTATCAAGATACCCTTTTGGACAACCGTGGAACTCATTTTTTCTATAGATGTTACATTCAAGGAGGTGTTGATTTTATCTGTGGCAGAGGAAAATCTTTGTATGAGGAGTGTACATTGAACTCAACAAGAGGAGGAGCAATAGCAGCACATAAAAGGGAAGAGAATGATGAGACAGGATTTTCCTTTGTAGGATGCAAAATCAAAGGATTAGGACCAACTCTTCTTGGAAGAGCATGGGGAAACTATTCAAGAATAGTATATTCATACTGCACTATGGATGATATTATTCAACCTCTGGGTTGGAGTGATTGGGGTGATCCCTCTAGACAACGGACTTCAATGTTTGGAGAATACAGGTGTGAGGGAAAAGGATCAAACAGAAGTAGAAGGACACAATGGTCATTTTCTTTGAAGGATGAGGAAGCTATGACATTCCTAGGTAGAGCCTTCATCAAAGGATACACTTGGCTTGCACTTTGA 933 0.4094 MKSVIVALSILAAAFVAATAASSRMNKYIMWRDLEVGEIEGKSNWGDGVIIVRQDGFGNSLLFKELWTWEKVYVPRDKPYISFIGKEGEIENEIPIITNNTKASDIDSNGQKLGTHNTYTNSAVPDGKGDQGVALRMDGDKAVLYRVRLLGYQDTLLDNRGTHFFYRCYIQGGVDFICGRGKSLYEECTLNSTRGGAIAAHKREENDETGFSFVGCKIKGLGPTLLGRAWGNYSRIVYSYCTMDDIIQPLGWSDWGDPSRQRTSMFGEYRCEGKGSNRSRRTQWSFSLKDEEAMTFLGRAFIKGYTWLAL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0615 310 SUPERFAMILY Pectin lyase-like 69 308 IPR011050 -
Sto1g0615 310 PANTHER PECTINESTERASE QRT1 70 309 - -
Sto1g0615 310 Gene3D - 43 310 IPR012334 -
Sto1g0615 310 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 70 309 - -
Sto1g0615 310 Pfam Pectinesterase 70 304 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0615 Sto-Chr1 5896194 5899990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0615 22 262 Carbohydrate Esterase AT5G55590 43.564 3.84e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0615 K01051 - gmx:100775690 293.508