Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0609 ATGTTGGAGGATCGAGGGTTGTTTGTGGTTGTGGTAGTGTTCATCAGCATTTGCATTCTGGGTTCCATGACCATTCTCATCAATGCTCAGACGGATCCCAATGATGCTGCTGCTCTAAGGGTTATGTTTAGCACTATGAACTCACCGTCTCAGCTAGGTTGGCCTGCAGATGGTGATGATCCGTGTGGACAGCACTGGAAAGGCATTACTTGCTCAGGCAATCGAGTCTCGGAGATAAAGTTACCTGGCTTGGCACTAACTGGTTCGTTGGGCTACCAGTTACAAACCTTGACATCTGTGACCAACCTaGATATGAGTAACAATAATCTTGGAGGCACTATTCCATACCAACTTCCTCCAAATGTGCAGCGATTAAACCTTGCTAATAATAACTTCACAGGGGGAGTCGTTTATTCAATTTCAGATATGACTTCTCTTATCTACCTGAATCTTGGTCACAATCAACTCCAGGATGGACTGACTGTCAACTTTGAAAAACTTTCTTCTCTCTCCACACTGGATCTCTCTTTCAATACTCTCTCAGGTGACCTTCCTCAGAGTTTGACCTCACTTTCAAGCATCAAAACCATGTATCTGCAAAACAACCAGTTTACGGGCACCATCGATGTCCTTGCTAATCTACCTCTCGATACACTGAATGTGCAGAGCAACCATTTCACCGGCTGGATACCAGAACGGTTGAAAAACATAAATCTACAGGGGGATGGTAATGCATGGAGCTCAGGTTCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTGACTAGAAGCACCCCAAGTCACAAATCCGGTAGCAGTGCAAGAAATGCTCCCTCAGATGCCGGTACGAGTGATGGAGACAAAAAATCTGGTATAGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCATTGTTGTTGGAGCAATAGTAGCATTCTTTCTGATGAAGAAACGATCCAGGAACAGGAAGCCATCTCCAGATTTAGAAAATGTCGACAATCAGCCATTTGCTCCTCTCACATCAAATGAAGTGCATGAAATGAAGTCTGTGCAAACATCCTCTGTACTTGACACGAAGACATTCAATACTTCTGCCTCATTCAATCTTAAACCTCCACCTATTGATCGTCACAAATCATTTGACGAAGAAGAATTTTCGAAAAAGCCTGTTATTGTCAAGAAAACTGTGACAGCTCCTGAAAATGTAACTATATATTCTATAGCAGACCTACAGATTGCTACTGGCAGCTTCAGTGTGGATCGCCTTCTTGGAGAGGGATCTTTTGGACGCGTCTACCGCGCTCAATTTAATGATGGACAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTTCCAATGATATGTCTGAAGATTTTATAGAAGTGGTTTCGAACATTTCGCAGTTACACCATCCAAATGTAACAGAGCTTGTTGGTTATTGTTCCGAGCACGGACAACATCTCCTAGTCTACGAGTTTCATAAAAGTGGATCACTGCACGACTTCCTTCACTTGCCAGATGAATATAGCAAACCATTGATATGGAATTCTCGTGTCAAGATTGCTTTGGGGACTGCGCGTGCTTTAGAGTATCTTCATGAAGTTTGTTCACCATCAGTtgttcataaaaatattaaatcagcCAATATATTGCTTGATTCGGAGATTAATCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATCCCAAATGCAGACCAGGTATTGAACCGTAATGCTGGATCGGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTTTGAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCGACACCACAACTTCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTGGAAGGGTTGTACCCTGTTAAATCTCTTTCTCGGTTCGCCGATGTTATCGCTCTTTGCGTTCAGCCGGAGCCTGAATTCCGACCGCCTATGTCAGAAGTGGTTCAAGCATTGGTTCGATTAGTGCAGCGCGCTAACATGAGCAAGCGAACATTTGGAACCGATCAAGGAGGATCGAACCGAGGAGGAGATGACCCAGAAGCACAAGACATGTAA 2172 0.4397 MLEDRGLFVVVVVFISICILGSMTILINAQTDPNDAAALRVMFSTMNSPSQLGWPADGDDPCGQHWKGITCSGNRVSEIKLPGLALTGSLGYQLQTLTSVTNLDMSNNNLGGTIPYQLPPNVQRLNLANNNFTGGVVYSISDMTSLIYLNLGHNQLQDGLTVNFEKLSSLSTLDLSFNTLSGDLPQSLTSLSSIKTMYLQNNQFTGTIDVLANLPLDTLNVQSNHFTGWIPERLKNINLQGDGNAWSSGSAPPPPPGTPPVTRSTPSHKSGSSARNAPSDAGTSDGDKKSGIGGGGIAGIVISIIVVGAIVAFFLMKKRSRNRKPSPDLENVDNQPFAPLTSNEVHEMKSVQTSSVLDTKTFNTSASFNLKPPPIDRHKSFDEEEFSKKPVIVKKTVTAPENVTIYSIADLQIATGSFSVDRLLGEGSFGRVYRAQFNDGQVLAVKKIDSSVLSNDMSEDFIEVVSNISQLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDFLHLPDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDSEINPHLSDSGLASYIPNADQVLNRNAGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGSNRGGDDPEAQDM 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0609 723 MobiDBLite consensus disorder prediction 701 723 - -
Sto1g0609 723 Gene3D Phosphorylase Kinase; domain 1 380 495 - -
Sto1g0609 723 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Sto1g0609 723 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Sto1g0609 723 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 21 719 - -
Sto1g0609 723 ProSitePatterns Protein kinases ATP-binding region signature. 424 447 IPR017441 GO:0005524
Sto1g0609 723 MobiDBLite consensus disorder prediction 263 280 - -
Sto1g0609 723 ProSiteProfiles Protein kinase domain profile. 418 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0609 723 PANTHER OS01G0253100 PROTEIN 21 719 IPR045271 GO:0004714|GO:0006468
Sto1g0609 723 MobiDBLite consensus disorder prediction 241 288 - -
Sto1g0609 723 SUPERFAMILY Protein kinase-like (PK-like) 400 690 IPR011009 -
Sto1g0609 723 Pfam Protein tyrosine and serine/threonine kinase 420 690 IPR001245 GO:0004672|GO:0006468
Sto1g0609 723 SUPERFAMILY L domain-like 30 236 - -
Sto1g0609 723 Gene3D Ribonuclease Inhibitor 32 251 IPR032675 -
Sto1g0609 723 CDD STKc_IRAK 424 693 - -
Sto1g0609 723 MobiDBLite consensus disorder prediction 322 344 - -
Sto1g0609 723 Gene3D Transferase(Phosphotransferase) domain 1 497 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0609 Sto-Chr1 5801899 5810204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0609 10 715 Strubbelig Receptor Gene Family AT1G53730 67.135 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sto1g0609 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0609 - - gmx:100780323 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0609 1 5801899 5810204 Sto1g0609 1 5801899 5810204 ECH