Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0602 aTGGGTGACTTATCGGGAGCTGCTAATAACAAATTGGACGACTCTGCCGCCGTTCAAATCACCGGTAAGATCATGGTCGCGGCCATAATAGTCCTCTTCTTCGTGGTTGTGATTGTGTGTTTCCTTCATCTCTACGCCAAGTGGTTCTGGTGGCGTATCGAAGAAAGCAGCAGCACCACGCCTGATCTTCGCAACCGCCGTCGCCGCCGCCGCCAGCGGTTCGTCTTCGCCGGACAAGACCCGGCGATCTACGGCGCACAGCGGCGCGGAATCGAGCCGGAAGTCCTTAGATCCATACCCGTTCTGGTGTACCAACCGGAGGATTTCAAAGAGGGTTTGGAATGTGCGGTTTGCCTCTGTGAGCTTGCTCAGGGAGAGAAAGCGAGGCTCTTACCGAAGTGCAACCATGGGTTTCACGTAGAGTGTATAGACATGTGGTTTCAGTCTCATTCTACTTGTCCATTGTGTAGGAACCCAGTTGCTTCTGAGTCCTCCAAATCTTGCTGCAGCTCAGGTGTTCGAGAAAATGCCTCAgagagtaataataataatagtgagTCATCATCAGATTCAGATAGTTCAGATGCTATGAGTGAGTTAGACTTGGAGTCTCCAAATTTTCCTACAAATGTATTGATTTGGGGGAATCAGACCCAAGTGAGTTCCAATGGTGAAGGTGCTTCACTTCAagcaccttcttcttcttcttcttcttcaacagCAGGTAGTAGCAGTAATGGTAACCATAGGCGTCAAGGAATGTTGGTGATTGATATACCAAGAGAGATCAATCCATCTTCTTTGTCACCATCAACTAGTAGGTTTGCAGAAGATCATGATCTGAAGTCCCCAGTGACATCTAGATTGAAGTCATTCAAGAGAATTTTAAGCTTAAAGTTCAGCCCTCGTAGTCCCAGTTCTGTAGATGTGGAACAAGGAGGGAGAGCACAGAACTAG 957 0.4577 MGDLSGAANNKLDDSAAVQITGKIMVAAIIVLFFVVVIVCFLHLYAKWFWWRIEESSSTTPDLRNRRRRRRQRFVFAGQDPAIYGAQRRGIEPEVLRSIPVLVYQPEDFKEGLECAVCLCELAQGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVASESSKSCCSSGVRENASESNNNNSESSSDSDSSDAMSELDLESPNFPTNVLIWGNQTQVSSNGEGASLQAPSSSSSSSTAGSSSNGNHRRQGMLVIDIPREINPSSLSPSTSRFAEDHDLKSPVTSRLKSFKRILSLKFSPRSPSSVDVEQGGRAQN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0602 318 MobiDBLite consensus disorder prediction 262 286 - -
Sto1g0602 318 SUPERFAMILY RING/U-box 95 161 - -
Sto1g0602 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 163 IPR013083 -
Sto1g0602 318 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 302 IPR044675 -
Sto1g0602 318 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Sto1g0602 318 Pfam Ring finger domain 114 157 IPR001841 -
Sto1g0602 318 MobiDBLite consensus disorder prediction 172 202 - -
Sto1g0602 318 CDD RING-H2_EL5_like 114 157 - -
Sto1g0602 318 MobiDBLite consensus disorder prediction 221 250 - -
Sto1g0602 318 SMART ring_2 115 156 IPR001841 -
Sto1g0602 318 PANTHER RING-H2 FINGER PROTEIN ATL3 8 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0602 Sto-Chr1 5737113 5738069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0602 19 297 C3H Transcription Factor Family AT1G53820 39.456 1.50e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0602 - - zju:107434456 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0602 1 5737113 5738069 Sto1g0602 1 5737113 5738069 ECH