Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0593 ATGAGCAACTCCAAACAAGCCTTCGCCGGAACCTCAGAttccggcggcggcggcggcaaccaaaagaagaggaggaatCTCTTCCTCGTTCTCTTCGCCACTCTGTTGCTCGTCGCCGCCGTAATCGGCGCCGTCGCCGGAGTAAATTCCCGCCAAAAGGCCTCCTCCTCCGACGACCATCCATCTCACGCGATAATCAAATCCGCGTGCAGGTCCACATTGTATCCGGAGCTCTGCTTCTCCGCCGTGACCTCGGAGCCAGGATTCTCCGAGAGAGTCACCTCGCAGCGCGACGTCATCGAGGTCTCCCTCAACATCACGACCAGGGCCGTGGAGCAGAATTTCTTCACCGTCGAGAAGCTAATCGCGAAGCGGAAGGGCCTCACGGAGCGGGAGAAGACCGCTCTCCACGACTGCCTCGAGACGATCGACGAGACGCTGGACGAGCTCCGCGCCGCCCTCGCGGATCTGAAGCTGTACCCGAACAAGAAGACTCTGCGCCAGCACGCCGACGATCTGAAGACTCTGATCAGCTCCGCCATCACCAATCAGGTCACCTGCCTCGACGGATTCTCGCACGACGGCGCCGACAAGAAGGTCCGCGGAGCTCTCGAGGCAGGGCAGGTGCACGTGGAGCGCATGTGCAGCAACGCGCTCGCGATGATCAAGAACATGACGGACACCGACGTCGCGAATTACGAAATGTCCGCCGTCGGAAAACAGAGCAGGCGGCTGTTGGCCGCCGCCGCGGCGGAGGAAGGCGGAGTGCGGTGGCCGGAGTGGATGCCGGCGGCGGACAGGAGGCTGCTTCAGGCGACGGAGGTGAAGGCGGACGTCGTCGTGGCGGCGGACGGGAGCGGCGACTTTAAGACGATCGCGGCGGCGGTTGAGGCGGCTCCTCAAAAGAGCAGCAAGAGATACGTGATTAAGATCAAAGCAGGGGTTTATAGAGAGAATGTGGAGGTTCCGAAGAAGAAGACGAATATTATGTTCTTGGGCGATGGAAGAACCAATACTATTATTACTGGAAGCAGAAATGTTGTTGATGGTAGCACAACCTTCCATTCCGCCACAGTTGCCGTCGTCGGAGAACGCTTCCTCGCCCGAGACTTAACCTTCGAGAACACGGCCGGCCACGCGAAGCACCAAGCCGTGGCCCTCCGAGTCGGCGGCGACCTCTCGGCCTTCTACAACTGCGACATCCTCGCCTACCAGGACACCCTCTACGTCCACAACAACCGCCAGTTCTTCATCAACTGCCTCATCGCCGGCACCGTGGACTTCATCTTCGGCAACTCCGCTGCCGTCTTCCAGGACTGCGACATCCACGCCCGCCGCCCCGGGTCCGGCCAGAAGAACATGGTGACTGCCCAGGGTCGCGTGGACCCGAACCAGAACACGGGCATCGTGATCCAGAAGTGCCGGATCGGGGCCACGAAGGACCTCGAGTCCGTCAAGGGGAGCTTCCGGACGTTCCTCGGGAGGCCGTGGAAGCAGTACTCCCGGACGGTGATCATGCAGACGAGCATATCGGACGTGATCGACCCGGTGGGGTGGCACGAGTGGAATGGGGATTTCGCGTTGGACACATTGTACTACGGTGAGTATCAGAACACAGGAGCGGGTGCTGGGACGTCAAAGAGGGTGAATTGGAAAGGGTTTAAGGTCATAACAAGTGCTTCTGAGGCTCAAGGGTTTAGTGCTGCTAATTTTGTTAGTGGCTCTACTTGGTTGGGATCTACTGGATTTCCCTTCTCTCTTGGGCTCtag 1770 0.5808 MSNSKQAFAGTSDSGGGGGNQKKRRNLFLVLFATLLLVAAVIGAVAGVNSRQKASSSDDHPSHAIIKSACRSTLYPELCFSAVTSEPGFSERVTSQRDVIEVSLNITTRAVEQNFFTVEKLIAKRKGLTEREKTALHDCLETIDETLDELRAALADLKLYPNKKTLRQHADDLKTLISSAITNQVTCLDGFSHDGADKKVRGALEAGQVHVERMCSNALAMIKNMTDTDVANYEMSAVGKQSRRLLAAAAAEEGGVRWPEWMPAADRRLLQATEVKADVVVAADGSGDFKTIAAAVEAAPQKSSKRYVIKIKAGVYRENVEVPKKKTNIMFLGDGRTNTIITGSRNVVDGSTTFHSATVAVVGERFLARDLTFENTAGHAKHQAVALRVGGDLSAFYNCDILAYQDTLYVHNNRQFFINCLIAGTVDFIFGNSAAVFQDCDIHARRPGSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLESVKGSFRTFLGRPWKQYSRTVIMQTSISDVIDPVGWHEWNGDFALDTLYYGEYQNTGAGAGTSKRVNWKGFKVITSASEAQGFSAANFVSGSTWLGSTGFPFSLGL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0593 589 CDD PMEI-like_3 68 226 - -
Sto1g0593 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 226 IPR035513 -
Sto1g0593 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 226 IPR035513 -
Sto1g0593 589 SMART PMEI_2 61 221 IPR006501 GO:0004857
Sto1g0593 589 Gene3D - 272 589 IPR012334 -
Sto1g0593 589 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Sto1g0593 589 Pfam Pectinesterase 278 574 IPR000070 GO:0030599|GO:0042545
Sto1g0593 589 Coils Coil 140 160 - -
Sto1g0593 589 TIGRFAM PME_inhib: pectinesterase inhibitor domain 41 225 IPR006501 GO:0004857
Sto1g0593 589 PANTHER PECTINESTERASE 23 588 - -
Sto1g0593 589 SUPERFAMILY Pectin lyase-like 275 588 IPR011050 -
Sto1g0593 589 PANTHER PECTINESTERASE 23 588 - -
Sto1g0593 589 Pfam Plant invertase/pectin methylesterase inhibitor 65 221 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0593 Sto-Chr1 5672081 5680811 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0593 20 589 Carbohydrate Esterase AT3G14310 69.759 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0593 K01051 - pvu:PHAVU_010G123100g 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0593 1 5672081 5680811 Sto1g0593 1 5672081 5680811 ECH