Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0581 ATGGCCGACACCTCTCAGAACCCTAGCCCTAAGATTTCCGCTTACTATCAAACCCGGGCGGCGCATCATAGCGTGGTTACCAGCGACTGGCTGGCTCAGGCTCATGCTGCCACCGCCAAGGACGCCGGTGACGACGGATTTTCCGGTGAGGAAGTCATTGCGTCCGATGATTCTGGCAGGGATGGGCACTTTAGTGTGATTGATGAGTTTAATAACTGGCGGAAACAACCCGATCTGGCGGAGGCTGTGGCGGCGATACGCGCTTTAGCGGCGATGATTAAGTCTAGTGAGGCAACGACTATGATGGAGCTGGAAATTGAGCTCAAGAAAGCCTCGGATTCTCTCAAAGATCTAAGGAATATTGTTCCTCCTAAAAAACTACAATGGAGTGTAGCCAGTTTTTCAAAAATACTGCTCAGTGCTCATATCGAACTGTCCTGGGATACAACATCTATCTCTTTGACAGCTGGCTGTGATCTGTTTATGCGATATGTAACTAGGACTTCTGCTTTAGAATATGAAGACTTTAATTCGGCAAAGTCTCGCCTAATTGAGCGTGCTGAAAAGTTTGGGGAAATTTCATGGAAGGCTCGCCAAACTATTGCAATGCTGAGTCAAGATTTTATATTTGATGGTTGTAAAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTTCTGAAACTGGCAgcagaaaataagaaaatcttTCAGGTCTTTTGCACAGAGGGAAGACCAGACCAAACAGGTTTATGGTTATCCAATGAACTGATCAAACTAGATATTCCTGTGAAACTCCTAATAGACTCTGCAGTGGCATATACCATGGATGAAGTAGACATGGTATTTGTGGGAGCAGATGGCGTAGTTGAAAGTGGGGGTATAATTAACATGATGGGGACATACCAAATTGCATTAATTGCACACAGTATGAATAAACCCGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCTATACCCTTTGGACCAAAAGGACTTGGCCCCTGCCTTACACCCAGTTGATTTTGGTGTACCAATTCCACCAAAGGTTAAAGTTGAAAGGTCAGCCAGGGACTATACTCCTCCTCAATATCTCACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCTTCTGTTGTTAGTGATGAGCTCATCCAGTTATACTTATAG 1179 0.4385 MADTSQNPSPKISAYYQTRAAHHSVVTSDWLAQAHAATAKDAGDDGFSGEEVIASDDSGRDGHFSVIDEFNNWRKQPDLAEAVAAIRALAAMIKSSEATTMMELEIELKKASDSLKDLRNIVPPKKLQWSVASFSKILLSAHIELSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISWKARQTIAMLSQDFIFDGCKILVHGFSRVVFEVLKLAAENKKIFQVFCTEGRPDQTGLWLSNELIKLDIPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALIAHSMNKPVYVAAESYKFARLYPLDQKDLAPALHPVDFGVPIPPKVKVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0581 392 SUPERFAMILY NagB/RpiA/CoA transferase-like 82 391 IPR037171 -
Sto1g0581 392 Gene3D - 196 392 IPR042529 -
Sto1g0581 392 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 145 392 - -
Sto1g0581 392 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 5 117 - -
Sto1g0581 392 Gene3D - 62 193 IPR042528 -
Sto1g0581 392 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 5 117 - -
Sto1g0581 392 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 145 392 - -
Sto1g0581 392 Coils Coil 101 121 - -
Sto1g0581 392 Pfam Initiation factor 2 subunit family 78 380 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0581 Sto-Chr1 5535910 5540430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0581 1 392 Eukaryotic Initiation Factors Gene Family AT1G53880 75.255 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0581 K03239 - mnt:21400979 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0581 1 5535910 5540430 Sto1g0581 1 5535910 5540430 ECH