Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0572 ATGTCGACTCTAGAGGAAATAGAGCCTAAGCATCTTAGCAACAAAGAGAATAATCAACTAGAAATAGACGATGACAACAACGACGGAGACAACTACAGTTATGCAATGCAGTTGGCGAGTTCACATGTGATTTCCATGTCGATGCAAACGGCAATTGATCTTGGCATTTTCGAGATCATTGACAGAGCCGGTCCTAAAGCGAAGCTCTCTGCCTTAGAGATCGCGTCTCGGCTCTCTTGCAAGAACCCTGAGGCTCCCTTTGCCATTGATCGTATCCTCCGATTGTTGGCATCTCACGCTGTACTTCAATGTTCAATCGTCGAACAAAATAATCAAGGGTTGAGATCTTTCCGGCGACTATATGGCCTCGCTTCAGTGGCCAAATACTTTGTGCCAAACACCAATGGTGCATCGTTAGGCCCCTTTATGGCGTTGTCTCATGATAAGGTCTTTCTTCAAACCTGGCCATTTCTCAAAGATGCAATTTTAGAAGGTGGAATTGCGTTCAATAAAGTGCATGGCTCACACGCCTTCGAGTATACAAGCTTGGACTCAAGGTTTAATGAGGTTTTCAACAAAGCAATGGTGAACCAAAGCACTATAGTTGTGAACAAGATTCTTGAATCCTACAAAGGTTTTAATGATATTAATACACTTGTTGATGTTGGTGGTGGTCTTGGAATTGCTCTCAAATTCATCACTTCCCAATACCCTCATATTCACGCTATTAATTTCGACTTGCCTCATGTTATACAACATGCTTCTCCTTATCCAGGAGTGCAGCACATTGGAGGAGATATGTTCGAAAGTGTGCCTAAAGGAGACGCCATCTTTATGAAGTGGATACTCCATGATTGGAGTGACGAACAGTGcttgaaacttttgaaaaattgcTATGATGCGATTCCTAACGAGGGAAAGGTAATAGTAGTGGAGGCGATTGTTCCCATTGTATTGGAAACAAGTGCTTATGTGAAGAGCATCTTTCAACTCGATATTGCTATGATGACCCAAATCCAAGGAGGCAAAGAACGGACTCAACAAGAGTTTTTGGATTTGGCAAAAATAGCTGGATTTAGTGGCATTCGATTTGAATGCAATGTTTGTAACTTTTGGGTTATGGAGTTCTTCaagtag 1137 0.4134 MSTLEEIEPKHLSNKENNQLEIDDDNNDGDNYSYAMQLASSHVISMSMQTAIDLGIFEIIDRAGPKAKLSALEIASRLSCKNPEAPFAIDRILRLLASHAVLQCSIVEQNNQGLRSFRRLYGLASVAKYFVPNTNGASLGPFMALSHDKVFLQTWPFLKDAILEGGIAFNKVHGSHAFEYTSLDSRFNEVFNKAMVNQSTIVVNKILESYKGFNDINTLVDVGGGLGIALKFITSQYPHIHAINFDLPHVIQHASPYPGVQHIGGDMFESVPKGDAIFMKWILHDWSDEQCLKLLKNCYDAIPNEGKVIVVEAIVPIVLETSAYVKSIFQLDIAMMTQIQGGKERTQQEFLDLAKIAGFSGIRFECNVCNFWVMEFFK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0572 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 378 IPR016461 GO:0008168
Sto1g0572 378 PIRSF O-mtase 12 378 IPR016461 GO:0008168
Sto1g0572 378 Gene3D - 12 130 IPR036388 -
Sto1g0572 378 Gene3D Vaccinia Virus protein VP39 132 378 IPR029063 -
Sto1g0572 378 SUPERFAMILY "Winged helix" DNA-binding domain 27 133 IPR036390 -
Sto1g0572 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 376 IPR029063 -
Sto1g0572 378 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 378 - -
Sto1g0572 378 Pfam O-methyltransferase domain 155 360 IPR001077 GO:0008171
Sto1g0572 378 PANTHER O-METHYLTRANSFERASE 11 378 IPR016461 GO:0008168
Sto1g0572 378 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
Sto1g0572 378 MobiDBLite consensus disorder prediction 1 26 - -
Sto1g0572 378 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0572 Sto-Chr1 5424689 5429514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0572 27 378 Monolignol Biosynthesis Gene Families AT5G54160 50.568 1.40e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0572 K13066 - zju:107423771 489.189