Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0562 ATggtcgacgacgtggatcgccgatcgtcggcgcagtgcaaaaatcaatcacgtatgggtaaactttttttctactcagaatcccacgtgcatatgacctgcatatgccgggtcaaaatgaagcctatgacaaaaggaagccccacaagaagtttcaaggcaatccgacctggTCGTGGCCAAATCCTTGATGGTCGACGACGTGAATCGCCGATcgtcggcgcagtgcaaaaatcaatcacgcacggCTCAGTTTTTGAAGTTGGAAACAATAACTACATCAACAACCCTCCTTCTCATAGGGCAAATTTCTGGCCTTATGGGGAGACCTTTTTCAGGTATCCCACCGGCAGATTTTCTGATGGACGCGTGATTCCAGATTTCATTAGTGACTATGCCAGATTGCCATTAAGTCTTCCATATTACTATCCTGGTTTTCAAAGTTACATTCATGGTACCAATTTTGCATCAGGAGGAGCTGGGGCTCTAGTTGAAACTCATAAAGGATTTGTGATTGATCTGAAGACTCAACTAAGTAATTTCATAAATGTTAAAGAGAGTTTGAGGCAAAGATTAGGAGATGATGAGAGTGCAAGATTGGTATCCAAAGCAGTTTACTTGTTGAATGTTGGAAACAATGATTATGCAGCTTTTGCAGAAAACTCCAAATTACAGTTTTCCAAGAAACCACAGGAATATGTGAACATGGTGCTTGGCAACATCACACATGTCATCAAAGAAATACACATGAATGGAGGGAGGAAATTTGGTTTTCTTGGATTGTGGAATTTGGGTTGTGTTCCAACTTCAAGACTACATGCAAATGAAAGCTCTGGCTCATGTTTGGAAGAACTTTCACTTCTGGCAAAATTGCATAACACTCAACTTTCTATGATTCTACAAAAGTTGGAGAAAGAGTTGGAAGGATTTAAATATGCACATACCAATTCCTATGATTTGATCAGTGACATGATTGATAACCCTTCAAAATATGgTTTCAAGGAAGGAAAAGTGGCATGCTGTGGGAGTGGTCCATACAGAGGCCATAATAGTTGTGGAGGCAAAAGAGGAGATCAATATTATGAATTGTGTGAGAATCCTAATGAATTTGTGTTCTTTGATGCCATTCATCTTTCTGAAAAGGCTTATAAGTTTTTTGCTAACCAAATGTGGGTTGGAGATAGAGGTATTACTTGGCCTTATAATTTGAGAGAACTATTTGAAGActga 1230 0.3179 MVDDVDRRSSAQCKNQSRMGKLFFYSESHVHMTCICRVKMKPMTKGSPTRSFKAIRPGRGQILDGRRRESPIVGAVQKSITHGSVFEVGNNNYINNPPSHRANFWPYGETFFRYPTGRFSDGRVIPDFISDYARLPLSLPYYYPGFQSYIHGTNFASGGAGALVETHKGFVIDLKTQLSNFINVKESLRQRLGDDESARLVSKAVYLLNVGNNDYAAFAENSKLQFSKKPQEYVNMVLGNITHVIKEIHMNGGRKFGFLGLWNLGCVPTSRLHANESSGSCLEELSLLAKLHNTQLSMILQKLEKELEGFKYAHTNSYDLISDMIDNPSKYGFKEGKVACCGSGPYRGHNSCGGKRGDQYYELCENPNEFVFFDAIHLSEKAYKFFANQMWVGDRGITWPYNLRELFED 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0562 409 Pfam GDSL-like Lipase/Acylhydrolase 86 389 IPR001087 GO:0016788
Sto1g0562 409 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 83 408 - -
Sto1g0562 409 CDD SGNH_plant_lipase_like 84 394 IPR035669 -
Sto1g0562 409 Gene3D SGNH hydrolase 83 392 IPR036514 -
Sto1g0562 409 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 83 408 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0562 Sto-Chr1 5320781 5327837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0562 84 390 Pollen Coat Proteome AT1G75910 30.063 2.96e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0562 - - gmx:100785243 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0562 1 5320781 5327837 Sto1g0562 1 5320781 5327837 ECH