Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0544 ATGGCTGATTCTTCTTTCGAAATTGATTACTACTCCTCAGGCCACCACTACCCACAACGCCACCCACCTACCCCAGCGAGTTCTCGCAATGCGTCTCGCTCTTTCACGGCGGCGGCGGCTTCGAGCTCTCACGACAACCAAAGAAGGGGCCGCCGGAACAGACCTCCGGCGACGCTCACTACCGCCGCCGCCTCCGACGACAACGACGACCATTCATGGCAGACGGAGGTTTCGTGGCAGTTTGAGCCCACTGGGTGGCGGGAGTACAGCAATCGAAACTTGGGCTCAGTTCTAAGCCCATGGGCCGCAAGCCCAACCCCATCTGATAGAAGTCGGGTTTTCCACCAATCCGCGAAAGACTATTACCTTTCTGGTGGCACTACGGGTGGGTTCTTCAGAGGGAGACGAAACGGCGTCGTCTGGGGGAACTCGTTCTCCGAGCATTCAGGGTGTGGCACCAGCACTAGCGTCGTTCCCTCCGGGAGAGTGGAGCTTCAGAGCCAGAGCTTCGTCGCCGAAGAAGAGAATGACGACGATATTCTCGATCTCGATCTCGACCTCGATCGGAGTCGGAAGTCGCCTCGCGGCGGAATTTCGAAATTGGAGATCATCAAGGAAGGGATCGTGGATACAACTACgaggaagaagacgaagaagaaggggaagggtAGTCCATTGGCGGATGAGGATGAATTGAGCTTGAATTGCTTCAGTATCGGCGGTCGCGATCTCGAACCATCGTATTCAAAACACGATAGttatgatgatggtggtgattaTGGAGGGGGACATAGTCATCATAATGGGATAGCTAGGGTTTCAGAGTTTGATGATGGTGAGGATGATGGTgagtatgatgatgatgaagatgaggaGGCTCTGAAGTCAGTTGGGTTGTTGAGCTTGTTCAGATACTCAACGAAGTGGGATATAGTGCTTATGATATTGGGTTGTTTGGGGGCTCTGGTTAATGGGGGATCACTTCCTTGGTATTCCTTTCTGTTTGGAAACATAGTCAATAAGATTTCTGGAGAATCAAAGGATGGTGGTCACAATTCCCAGATGCTCAAGGATGTGGAGACGATATGCTTGTTCATGACTGGGTTAGCTGCAATAGTGATGGTTGGAGCATATTTGGAGATCACATGTTGGAGATTGGTTGGGGAGCGATCTGCTCAAAGAATAAGAAGTGAGTATTTAAGAGCAATTCTTCGTCAGGACATTAGCTTTTTTGATACGGAGATCAGCACTGCAGATATTATGCATGGGATTGCAAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGAGAAGATGGCTCACTTCATTCATCATGTATGCACATTTATATGTGGGTACACAGTTGGGTTTCTAAGATCATGGAAAGTCTCTCTTGTGGTATTCTCAGTCACCCCTGTGACCATGTTCTGTGGTATAGCATACAAGGCTATTTATGGCGGATTAGCAGCAAAAGAGGAAGCTTCTTATAGGGAGGCTGGTAGCATTGCAGAGCAGGCCATCAGTTCAATTAGGACagtgttttcttttgttgcaGAAAGCCAGTTGGCTGCAAAATATTCTCAACTTCTGGAGAGATCAGTCCCTGTTGGGGCAAAAGTTGGCTTTGCTAAGGGTTTAGGCATGGGAGTTATCTATTTAGTAACCTATTCAACATGGGCATTGGCTTTCTGGTATGGCTCTATCTTAATTTCCAGGAAGGAGATTGATGGAGGTAAAGCCATTGCTTGTTTCTTTGGTGTCATGGTTGGGGGAAGAGGCTTGGCATTGTCACTAACATATTATGCACAGTTCGCACAAGGCATTGTTGCAGCAAGCCGAGTATTTGAAATCATAGATAGAATCCCTGAGATTGATCCCTACAGCcctgagggaaggaagctttcTAGTGTTCGTGGGAAGATTGAGTTCAAAAATGTTAGTTTTGCATACCCTTCACGTCCTGATGCTCTAATCCTTAATTCCCTCAAATTAGTGATTCCATCTTCAAGAACCACGGCACTAGTTGGTGCCAGTGGAGGGGGCAAGTCCACCATTTTTGCTCTCATAGAGAGGTTTTATGATGCCATTGAAGGAATTGTAACCTTGGATGGTCATGATTTGAGGACACTGCAAGTCAAGTGGCTAAGAGATCAGATAGGTTTGATGGGTCAGGAGCCAATTCTCTTTGCCACAACCATATTGGAGAATGTGATGATGGGGAAGGACAATGCCACCAAGAAAGAGGCAATTGCTGCTTGCATTGCTGCTGGTGCCCACAACTTCATCTCTAGCCTTCCCTTAGGCTATGACACTCAGGTTGGGGACAGAGGTACCCGACTCTCAGGAGGTCAAAAGCAGCGAATTGCATTGGCTCGAGCCATGGTCAAAGATCCTAAAATCCTTCTCTTAGATGAACCTACCAGTGCTCTTGATGCTGAGTCAGAGTCTGTGGTCCAACAGGCCATTGACAAGATTTCTGATGGTCGGACAACCATTGTCATTGCTCACAGGATAGCAACAGTAAAGAATGCTCATACCATTGTAGTTCTTGAAAATGGTTCTGTCACTGAAATTGGCGACCATCGCCAGCTTATGGCAAAGGCAGGCGCCTATAATAGCCTTGTCAAGCTTGCTACAGAAGCTAATTCAATGCCAGTGTCTAAAGAAAGGAGTATACAAAGGGCCAGTGATCTTTCCATCTATGATAAATCAGTTCTTGAtgtatcaaaatcaaaatatgcTGTTGATATCCCAACATCGAAGTACTTAAAATCAATGCAAGATGAAAAACGAGCAGAAATAGAAGAAGATCAACCGAAAATGCCGAGAGATTTCCGAGTTTCTGAGATATGGAAACTGCAGAAACCAGAGGTTGTTATGTTGTTTTCGGGATTTCTTCTTGGTATGCATGCAGGTGCTTTTCTGTCCATTTTTCCATTGATTTTAGGCATAGCCCTTGATGTATACTTTGACAAAGACACTTCAAAGATGAAAACAGATATTGCACATCTTTGTTTAGTACTTGTTGGGCTTGGATTTGGCTGCATAATTTCCATGACAGGACAGCAAGGTTTATGTGGTTGGGCTGGATCAAAGCTCACAATGAGGGTTAGAGCTCTATTATTTCGATCCATACTGAAACAGGAACCAGGGTGGTTTGATTTTGAAGACAACTCCACTGGAGTGCTAGTGTCAAGGCTATCTATTGACTGTATTAGTTTTCGATCAGCACTTGGTGATCGATTCTCGGTCCTTTTAATGGGGTTGAGCTCGGCTGCCGTAGGGCTTGGCGTGTGTTTTTACTTTGAATGGAGACTAACCCTTGTGGCTGCTGCTCTAACTCCTCTGACTCTTGGTGCTAGCTATCTAAACTTGATCATAAACATTGGACCACGAGTTAACAACGATTCTTATGCCAGAGCTAGCAACATTGCTTCTGGTGCAGTTTCAAACATAAGAACAACTACTGCATTTTCTGCCCAAGAGCAGATAGTCAAGTCCTTCGATCGAGCTTTATCAGAACCTAGGAAAAAATCAGTTCAAAGGTCACAGATTCTTGGACTAACACTTGGTTTCTTCCAAGGTGCCATGTATGGAGCATACACTTTAACTCTTTGGTTTGGTGCCAAACTTGTGGAACTAAACAAAACAGATTTCGGGGACGTGTATAAAATTTTTCTCATTCTTGTTTTGAGTTCATTTTCTGTGGGACAACTAGCTGGTCTAGCACCAGATACCTCTCTGGCAGCTACAGCAATTCCAGCAGTTCTAGATATTATATATCGCAGGCCTTTGATAGGCAAGGATGGTATAAGAGGTAAGAAACTAGAAAGATCAAAGCCGATGAAGCTGGAATTCAAAATGGTGACATTTGCATATCCATCTAGGCCTGAGGTGACAGTGTTGAGGAATTTCGATTTGAAGGTCAAAGATGGAAGTACAGTTGCCTTAGTAGGTTCAAGTGGATCAGGAAAATCAACAGTAATTTGGTTGATACAGAGATTCTATGATCCAAATCAAGGGAAGGTGATGATGGGTGGGTTAGACTTGAAGGACCTTGATGTGAAGTGGTTAAGGAGGCAAATAGCTTTGGTGGGTCAAGAACCTGCACTGTTTGCTGGAAGTATAAGGGAGAATATTGCCTTTGGAGACCCAGAAGCCTCATGGGCTGAGATTGAAGTGGCAGCAAAGAAAGCATACATTCACAAATTTATCAGTGGCCTTCCTCAAGGTTATGAAACTCAGGTTGGTGAAAGTGGGGTTCAGCTATCAGGTGGCCAAAAGCAGAGAATTGCAATAGCAAGAGCCATATTGAAGAAATCAAGGGTACTACTGCTTGATGAAGCAAGTAGTGCACTGGATCTGGAATCAGAGAAGCATGTACAAGAAGCACTCAAGAATGTTGCAAAAGATGCAACAACCATAATAGTGGCCCATCGTCTTTCTACAATCAAAGATGCTGATAACATCGCAGTTGTGAAAGATGGTACAGTGGCTGAGTATGGCAGCCATGAAACCCTCATGGCTTTCCATCATAATGAGAGATTAGATCTAGCTTTTTAA 4563 0.4372 MADSSFEIDYYSSGHHYPQRHPPTPASSRNASRSFTAAAASSSHDNQRRGRRNRPPATLTTAAASDDNDDHSWQTEVSWQFEPTGWREYSNRNLGSVLSPWAASPTPSDRSRVFHQSAKDYYLSGGTTGGFFRGRRNGVVWGNSFSEHSGCGTSTSVVPSGRVELQSQSFVAEEENDDDILDLDLDLDRSRKSPRGGISKLEIIKEGIVDTTTRKKTKKKGKGSPLADEDELSLNCFSIGGRDLEPSYSKHDSYDDGGDYGGGHSHHNGIARVSEFDDGEDDGEYDDDEDEEALKSVGLLSLFRYSTKWDIVLMILGCLGALVNGGSLPWYSFLFGNIVNKISGESKDGGHNSQMLKDVETICLFMTGLAAIVMVGAYLEITCWRLVGERSAQRIRSEYLRAILRQDISFFDTEISTADIMHGIASDVAQIQEVMGEKMAHFIHHVCTFICGYTVGFLRSWKVSLVVFSVTPVTMFCGIAYKAIYGGLAAKEEASYREAGSIAEQAISSIRTVFSFVAESQLAAKYSQLLERSVPVGAKVGFAKGLGMGVIYLVTYSTWALAFWYGSILISRKEIDGGKAIACFFGVMVGGRGLALSLTYYAQFAQGIVAASRVFEIIDRIPEIDPYSPEGRKLSSVRGKIEFKNVSFAYPSRPDALILNSLKLVIPSSRTTALVGASGGGKSTIFALIERFYDAIEGIVTLDGHDLRTLQVKWLRDQIGLMGQEPILFATTILENVMMGKDNATKKEAIAACIAAGAHNFISSLPLGYDTQVGDRGTRLSGGQKQRIALARAMVKDPKILLLDEPTSALDAESESVVQQAIDKISDGRTTIVIAHRIATVKNAHTIVVLENGSVTEIGDHRQLMAKAGAYNSLVKLATEANSMPVSKERSIQRASDLSIYDKSVLDVSKSKYAVDIPTSKYLKSMQDEKRAEIEEDQPKMPRDFRVSEIWKLQKPEVVMLFSGFLLGMHAGAFLSIFPLILGIALDVYFDKDTSKMKTDIAHLCLVLVGLGFGCIISMTGQQGLCGWAGSKLTMRVRALLFRSILKQEPGWFDFEDNSTGVLVSRLSIDCISFRSALGDRFSVLLMGLSSAAVGLGVCFYFEWRLTLVAAALTPLTLGASYLNLIINIGPRVNNDSYARASNIASGAVSNIRTTTAFSAQEQIVKSFDRALSEPRKKSVQRSQILGLTLGFFQGAMYGAYTLTLWFGAKLVELNKTDFGDVYKIFLILVLSSFSVGQLAGLAPDTSLAATAIPAVLDIIYRRPLIGKDGIRGKKLERSKPMKLEFKMVTFAYPSRPEVTVLRNFDLKVKDGSTVALVGSSGSGKSTVIWLIQRFYDPNQGKVMMGGLDLKDLDVKWLRRQIALVGQEPALFAGSIRENIAFGDPEASWAEIEVAAKKAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVAKDATTIIVAHRLSTIKDADNIAVVKDGTVAEYGSHETLMAFHHNERLDLAF 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0544 1520 MobiDBLite consensus disorder prediction 58 73 - -
Sto1g0544 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 877 IPR003439 GO:0005524
Sto1g0544 1520 ProSitePatterns ABC transporters family signature. 780 794 IPR017871 GO:0005524
Sto1g0544 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 964 1248 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0544 1520 PANTHER - 114 1511 - -
Sto1g0544 1520 MobiDBLite consensus disorder prediction 23 44 - -
Sto1g0544 1520 Gene3D - 1277 1517 IPR027417 -
Sto1g0544 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 606 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0544 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1281 1511 IPR027417 -
Sto1g0544 1520 CDD ABC_MTABC3_MDL1_MDL2 641 878 - -
Sto1g0544 1520 SUPERFAMILY ABC transporter transmembrane region 302 626 IPR036640 GO:0005524|GO:0016021
Sto1g0544 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 876 IPR027417 -
Sto1g0544 1520 Pfam ABC transporter 1302 1450 IPR003439 GO:0005524
Sto1g0544 1520 Pfam ABC transporter 659 808 IPR003439 GO:0005524
Sto1g0544 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1284 1520 IPR003439 GO:0005524
Sto1g0544 1520 ProSitePatterns ABC transporters family signature. 1423 1437 IPR017871 GO:0005524
Sto1g0544 1520 CDD ABC_6TM_Pgp_ABCB1_D2_like 951 1266 - -
Sto1g0544 1520 SMART AAA_5 1311 1504 IPR003593 -
Sto1g0544 1520 SMART AAA_5 668 854 IPR003593 -
Sto1g0544 1520 MobiDBLite consensus disorder prediction 1 73 - -
Sto1g0544 1520 CDD ABC_MTABC3_MDL1_MDL2 1285 1509 - -
Sto1g0544 1520 CDD ABC_6TM_Pgp_ABCB1_D1_like 314 614 - -
Sto1g0544 1520 Gene3D - 631 879 IPR027417 -
Sto1g0544 1520 Gene3D ABC transporter type 1, transmembrane domain 301 1252 IPR036640 GO:0005524|GO:0016021
Sto1g0544 1520 SUPERFAMILY ABC transporter transmembrane region 950 1435 IPR036640 GO:0005524|GO:0016021
Sto1g0544 1520 Pfam ABC transporter transmembrane region 314 590 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0544 1520 Pfam ABC transporter transmembrane region 963 1232 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0544 1520 PANTHER ABC TRANSPORTER B FAMILY 114 1511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0544 Sto-Chr1 5113517 5122992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0544 992 1513 Calmodulin-binding Proteins AT2G36910 39.122 1.12e-100 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0544 K05658 - gmx:100816700 2011.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0544 1 5113517 5122992 Sto1g0544 1 5113517 5122992 ECH