Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0525 ATGGCCGTAGCTCCGGCGAATCTCCGGCCAACtctgttcttcttcttcgtcttctttcTTGTACTCCGATCGGTGCATTCAATGTCAGAAGCCGAAGCTTTGATTAATTTCAAAAACTCATTCTCCGATTCGCAAGCCCTAAAAAATTGGGTTCCTAATTCCGTTCCTTGCGAGAAAGGGAAAAGATGGGAAGGAGTTGTATGCAACAATGGCGGCTTCGTCAATGGGCTTCGATTAGAAGGAATGGGACTATCCGGTAAGATCGATGTGAATCCATTGGTAGAACTCAAGGGTCTCCGAAGTTTCAGCGTGAAGAACAATTCCCTCTCAGGTTCGATTCCCGAAATGAATCGAATAGGGTTCTTGAGGAATCTGTACTTATCGGAGAATCAAttctccggcgagattccgccGGATTTCTTCCAGAAAATGAGGTCTCTGAAGAAACTATGGCTTTCCGATAACAAATTCACCGGTCAGATTCCTTCTCAGATCCCTAATGTCGTGGAGCTACATCTCGAGAACAACCAGTTCAGTGGGGTTATCCCGAATCtgagcaaaacgacgtcgttgtTGCAATTCAACGTGTCCAACAATAAATTGGAGGGTGAAATCCCACAGGGCTTATCAAGATTCAATGAGAGTTCATTTTTAGGGAATTCTGGTCTCTGTGGTGGAAATTTAGGAACATCATGTGACAAATTGGTTGAATCTCCAAAACCCATAGAAAATACAGAACAAAATGACAAAAAGAGCAATAAGAGTAGTCATTCACTGAAGATTGCTGCCATTGTTGTAGCATCAAGCATAGTGCTTCTCACACTTATTGCCTTACTCTTTCTGAGATcaaggagaaagaagaagaaggagggaaTACTCAATACAGCTAGACAAGAAGAAGCAGTGGAAGTTCAGGTTTTACCACAAGTAAAGAAAGAAGAGGGAAATCTATCCAGAAAATCAAGTCATTGTAGTTCTAGCAGAAGGGGATCGAATAGGGGTGGCGGAGGCGTGGGAGAGCTCGTGATGGTGAATGATGaaaagggtgtgtttgggatgCTGGATTTGATGAAAGCAGCTGCTCAAGTTCTGGGGAATGGAGGGTTTGGATCTTCTTACAAAGCAGTGATGGGTAATGGGATGACCGTGGTGGTGAAGAGGACAAGGGACATGAATTTGTTGGGGAAAGATGGGTTTGATGCAGAGATGAGGAAGCTTGGGAGTGTGAGACATAGGAATTTATTGACTCCTTTGGCTTATCATTTCAGAAAAGATGAGAAGTTGGTGGTGTTTGAGTTTGTTCCTAAAGGCAGTCTGCTCTTTTTGCTGCATGGTGATCGTGGACCATCTCATGAAGAACTAGATTGGCCTACTCGTTTAAAGATTGTACAAGGGATTGTTGAAGGGATGCTTTATCTACATACACAGCTTGCTTCCTGTGTTTTACCCCATGGCAATCTCAAGTCCAGCAATATTCTTCTTGGTCCTAACTATGAGCCAATGCTAGTAGATTTTGGCTTTTTCCCCTTGATCAACCCTCCCAATCTAACACAAGCTTTATTTGCTTATAAGACTCCTGAAGCATCACAAGAAGGCCAAGTTTCTCCCAAATCTGATGTTTTTTGTCTTGGAGTCGTCATTCTCGAGATCCTCTCTGGGAAATTCCCTTCTCAATATCACCACAATGGCAATAATGGTGGAACTGATGTAGTGGAATGGGCTGCCTCTGCCATTTCTGAAGGGAGGGTATTAGAGATGCTCGATCCCCAGCTTGAAAACTCCAAAGATTCACTTGCTGAGATGGAGAGACTCCTCCTTGTTGGTGTTGCTTGCACTGCAAGTAACCCCGAGGAGCGATTAGACATGACAGAAGCATTTAGAAGGATAGAGGAGATACAAATAGAAGGTGTCCAAGGATCGAGTGCACAAGGCCAGAATGAGTGGCGGTCTCGGACGAGCTTCGGATCTAACAGCATTGGAAGCCGATCGGAGCATCGAGATAGTGATAGTTTTGACATTTCTTAA 2025 0.4143 MAVAPANLRPTLFFFFVFFLVLRSVHSMSEAEALINFKNSFSDSQALKNWVPNSVPCEKGKRWEGVVCNNGGFVNGLRLEGMGLSGKIDVNPLVELKGLRSFSVKNNSLSGSIPEMNRIGFLRNLYLSENQFSGEIPPDFFQKMRSLKKLWLSDNKFTGQIPSQIPNVVELHLENNQFSGVIPNLSKTTSLLQFNVSNNKLEGEIPQGLSRFNESSFLGNSGLCGGNLGTSCDKLVESPKPIENTEQNDKKSNKSSHSLKIAAIVVASSIVLLTLIALLFLRSRRKKKKEGILNTARQEEAVEVQVLPQVKKEEGNLSRKSSHCSSSRRGSNRGGGGVGELVMVNDEKGVFGMLDLMKAAAQVLGNGGFGSSYKAVMGNGMTVVVKRTRDMNLLGKDGFDAEMRKLGSVRHRNLLTPLAYHFRKDEKLVVFEFVPKGSLLFLLHGDRGPSHEELDWPTRLKIVQGIVEGMLYLHTQLASCVLPHGNLKSSNILLGPNYEPMLVDFGFFPLINPPNLTQALFAYKTPEASQEGQVSPKSDVFCLGVVILEILSGKFPSQYHHNGNNGGTDVVEWAASAISEGRVLEMLDPQLENSKDSLAEMERLLLVGVACTASNPEERLDMTEAFRRIEEIQIEGVQGSSAQGQNEWRSRTSFGSNSIGSRSEHRDSDSFDIS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0525 674 Pfam Protein kinase domain 362 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0525 674 MobiDBLite consensus disorder prediction 312 339 - -
Sto1g0525 674 Gene3D Transferase(Phosphotransferase) domain 1 434 651 - -
Sto1g0525 674 MobiDBLite consensus disorder prediction 636 674 - -
Sto1g0525 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 637 - -
Sto1g0525 674 SUPERFAMILY Protein kinase-like (PK-like) 362 630 IPR011009 -
Sto1g0525 674 Gene3D Ribonuclease Inhibitor 27 167 IPR032675 -
Sto1g0525 674 Gene3D Ribonuclease Inhibitor 168 232 IPR032675 -
Sto1g0525 674 SUPERFAMILY L domain-like 27 212 - -
Sto1g0525 674 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Sto1g0525 674 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 8 637 - -
Sto1g0525 674 Gene3D Phosphorylase Kinase; domain 1 353 433 - -
Sto1g0525 674 MobiDBLite consensus disorder prediction 636 661 - -
Sto1g0525 674 ProSiteProfiles Protein kinase domain profile. 358 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0525 Sto-Chr1 4914727 4917529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0525 12 634 Receptor kinase-like Gene Family AT3G42880 44.930 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto1g0525 Pkinase 8.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0525 - - gmx:100814059 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0525 1 4914727 4917529 Sto1g0525 1 4914727 4917529 ECH