Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0519 ATGGAGCCGCCGCCGCCGGAGAACAATAATGCTGCCGCCTTACCGTTTGAGACAGCGGAGAAGATTATACTCCGGTGGGACTCTACAGCTTCCGAGGAGGCTCGCGAGAAGATGATCTTCCAGAGTGACCGCCAAGAGGTCGATCGCTACTTGCTCGCCGTCGATGAAATCCAACGCTCTATGTCCTCCACTTCCATCTCCGACGACCATAACAAGCTCAACTCCGCCCTTCAGATCGCCATGGCTCGCTTGGAAGACGAATTCCGTAACATCCTTATTTCGCACACTAACCCTATCGAGGCCGATTCGTTGATGACGACGGATCCTAGTTCGTCGTCTCGCTCGATTTCTTCAAATACTGAGGTAGACGACGAAGGTACTATTGccgacgaagaagaagaagaggacgaCGATGCTGCTGCTGCTGATGCTGAGGGTGATGGTGATGCTTCTTCCGTGAGCAAAGGTAACAAACTTCTTCGCTATCACAGTGGCGAGTCCATTTCCGTTAGTAATTCTTCCTCTAGCTACCGATCGACCAGCAGTATCCGCGAGATCGATCTGATACCTTCTGACGCCGTTTACGACCTCCGGAGCATAGCGGAGCGGATGATCTCGTCTGGATATTTGCGCGAGTGCATCCAGGTTTACGGTAGTGTGAGAAAATCCGCCGTTGATGCGAGTTTCCGGAGACTTGGGATTGAGAAATTGAGCATCGGCGACGTCCAACGGTTGGAGTGGGACCAGCTGGAAGCTAAGATCCGACGGTGGATAAGGGCTGCTAAGGTCTGTATTAGAACGTTGTTCTCAAGCGAGAAGAAGCTATGTGAGCAAATCTTTCATGGAATTGGCACTGCAATTGATGATGCTTGCTTTATGGAAACAGTAAAAGGCCCCGCAATTCAGCTTTTCAATTTTGCTGAAGCTATTAGTATTAGCCGAAGGTCCCCTGAGAAGTTGTTTAAGATACTAGACCTTCATGATGCTTTAATGGATTTGATACCTGATATTGATATTGTGTTTGATTCAAAGTCTTCTGAGTCGATTCGCATTCAGGCTGCTGAGATACTGTCTCGTTTGGCTGAAGCAGCAAGAGGTATATTGTCTGAGTTTGAGAATGCTGTGCTTCGTGAGCCATCCAAGACAATGAATGAGCTTATAGTGTCTAAACCATCGACCGGGTCGCGATACTCGGGCGATCCTTCTACCCCAGATTTGGATTTTACTGAACTAGAGGGGAAAAACCCACTGGCTATTCACTTGATCTGGATAATTGTGATATTGCAATTTAACTTGGAAGGTAAGTCTAAGCATTACAAGGATGCATCATTGTCTCATTTGTTTATCATGAACAATATTCACTACATTGTTCAGAAGGTAAAAGGGTCACCTGAGTTGAGGGCGATGATTGGAGATGATTATTTGAAGAAGATGGCTGGGAAACTACAGCAGGCAGCTACTAGCTACCAGAGAGCGACATGGGTGAAAGTGCTGTCTTGTTTAAGGGATGAAGGGTTACATGTGAGTGGGGGATTTTCTTCTGGGGTCTCAAAGAGTGCTTTAAGAGAAAGGTTCAAGTCCTTCAATGCAATGTTTGAGGAGGTACATAGGACTCAAGCAACTTGGTTGATTCCAGATTCTCAACTCCGGGAAGAGCTTCGGATATCGATATCAGAGAAGTTGATCCCAGCATATAGGTCGTTTCTTGGGCGGTTCAGAAGTCATATAGAGAGTGGAAGGCATCCAGAGAATTACATTAAGTATTCAGTTGAGGACTTGGAAGCTGCTGTTCTGGATTTTTTTGAAGGACACCCAGTTTCCCAGCACTTAAGAAAGAGATCTCAATGA 1848 0.4594 MEPPPPENNNAAALPFETAEKIILRWDSTASEEAREKMIFQSDRQEVDRYLLAVDEIQRSMSSTSISDDHNKLNSALQIAMARLEDEFRNILISHTNPIEADSLMTTDPSSSSRSISSNTEVDDEGTIADEEEEEDDDAAAADAEGDGDASSVSKGNKLLRYHSGESISVSNSSSSYRSTSSIREIDLIPSDAVYDLRSIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGIEKLSIGDVQRLEWDQLEAKIRRWIRAAKVCIRTLFSSEKKLCEQIFHGIGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDIVFDSKSSESIRIQAAEILSRLAEAARGILSEFENAVLREPSKTMNELIVSKPSTGSRYSGDPSTPDLDFTELEGKNPLAIHLIWIIVILQFNLEGKSKHYKDASLSHLFIMNNIHYIVQKVKGSPELRAMIGDDYLKKMAGKLQQAATSYQRATWVKVLSCLRDEGLHVSGGFSSGVSKSALRERFKSFNAMFEEVHRTQATWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEAAVLDFFEGHPVSQHLRKRSQ 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0519 615 Coils Coil 67 87 - -
Sto1g0519 615 PANTHER EXOCYST COMPLEX PROTEIN EXO70 168 381 IPR004140 GO:0000145|GO:0006887
Sto1g0519 615 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 114 IPR004140 GO:0000145|GO:0006887
Sto1g0519 615 PANTHER EXOCYST COMPLEX PROTEIN EXO70 381 615 IPR004140 GO:0000145|GO:0006887
Sto1g0519 615 SUPERFAMILY Cullin repeat-like 33 602 IPR016159 -
Sto1g0519 615 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 381 615 - -
Sto1g0519 615 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 168 381 - -
Sto1g0519 615 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 12 114 - -
Sto1g0519 615 MobiDBLite consensus disorder prediction 101 156 - -
Sto1g0519 615 MobiDBLite consensus disorder prediction 101 123 - -
Sto1g0519 615 MobiDBLite consensus disorder prediction 124 144 - -
Sto1g0519 615 Pfam Exo70 exocyst complex subunit 381 597 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto1g0519 615 Gene3D Exocyst complex component Exo70 22 131 - -
Sto1g0519 615 Gene3D Exocyst complex component Exo70 150 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0519 Sto-Chr1 4851017 4852945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0519 7 615 EXO70 exocyst subunit family AT1G72470 65.258 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0519 K07195 - zju:107435532 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0519 1 4851017 4852945 Sto1g0519 1 4851017 4852945 ECH