Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0508 ATGCCCTCCACAAGGCTCCAATTGAAAACCCTTCTGCTTGGCTGCTTCATCAAGGCCAAGAATACCAAATCCTTGCATCCAAACAACACAGTTTCCAAACACACACCTTCTTCAAGGAGGCTATCCCTCTCTGACTTGAGCAATGCTTCTTCTTCAGTCTCCATCATGAGTGATCTGTCCAACTCTCTTCTGGGATCAAATCTCCATATCTTCACCTTCAAGGAGCTCAAAGAGATCACTCACAATTTCAGCAGAAGTAGTGTTCTTGGAGAAGGAGGGTTTGGGAAGGTGTATAAAGGCTTCATTGATGATAAGCTTAGGCTTGGCTTGAAACCTCAAGTTGTAGCAGTTAAGGTGTTAGACTTGGATGGGAAACAAGGCCATAGAGAGTGGTTGGCTGAAGTAATATTTCTGGGGCAGTTGAAGCATCCCCATCTGGTGAACCTAATTGGGTATTGTTGTGAAGATGAGCACAGGCTTCTGGTGTACCAATACATGGAAAGGGGAAATCTAGAAGACAAGCTTTTCAAagGCTATGTTGCAACTTTGCCATGGCTAATAAGAATCAAAATAGCAATTGGTGCTGCAAAGGGTCTTGCTTTTCTTCATGAAGAAGAAAAACCAGTCATATACAGAGATGTTAAAGCCTCAAACATACTGTTAGATGCTGATTACAATGCCAAACTCTCTGATTTTGGACTTGCAATAGATGGTCCAGAAGAACATCAAACACACATCACAACTAGAGTTATGGGCACCCATGGCTATGCTGCTCCTGAATACATCATGACAGGGCATTTAACAACCATGAGCGATGTATACAGCTTTGGGGTAGTTCTATTGGAGCTACTTACAGGGAAGAGATCAGTGGACAAGAATCGACCTTCTAGAGAGCAAGATTTGGTAGAGTGGGCTAGACCTCTTCTGAAAGACACCCACAAGCTCGAAAGACTCATAATGGATCCAAGACTCGAGGGTCAGTACTCCATTGAAGGGGCTCGAAAGGTGGCTGCTTTGGTTCACCAATGTCTTAGCCATCAGGCCAAGGCTCGACCCTCAATGCGCACCGTGGTCAAGTCCCTCGAGCCCATCATGAACCTCACTCATGATATCCCGATTGGCCATTTCGTCTATTTGGCTCCTAATGAGGGAGAAATTGAAGTCAAATTTGTTGGAAGCAACATATTGCAGAGTAAGCACGGAATgagggtggtggttgatggtggtccAGGAACGACGACGTATTTGCTCTTCAGTCTTGACGGTTGA 1269 0.4366 MPSTRLQLKTLLLGCFIKAKNTKSLHPNNTVSKHTPSSRRLSLSDLSNASSSVSIMSDLSNSLLGSNLHIFTFKELKEITHNFSRSSVLGEGGFGKVYKGFIDDKLRLGLKPQVVAVKVLDLDGKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYQYMERGNLEDKLFKGYVATLPWLIRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEHQTHITTRVMGTHGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKRSVDKNRPSREQDLVEWARPLLKDTHKLERLIMDPRLEGQYSIEGARKVAALVHQCLSHQAKARPSMRTVVKSLEPIMNLTHDIPIGHFVYLAPNEGEIEVKFVGSNILQSKHGMRVVVDGGPGTTTYLLFSLDG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0508 422 PANTHER OS01G0588500 PROTEIN-RELATED 34 387 - -
Sto1g0508 422 ProSitePatterns Protein kinases ATP-binding region signature. 89 118 IPR017441 GO:0005524
Sto1g0508 422 ProSiteProfiles Protein kinase domain profile. 83 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0508 422 SMART serkin_6 83 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0508 422 Gene3D Phosphorylase Kinase; domain 1 54 165 - -
Sto1g0508 422 SUPERFAMILY Protein kinase-like (PK-like) 58 362 IPR011009 -
Sto1g0508 422 Gene3D Transferase(Phosphotransferase) domain 1 166 371 - -
Sto1g0508 422 PANTHER BNAA02G16030D PROTEIN 34 387 - -
Sto1g0508 422 CDD STKc_IRAK 89 364 - -
Sto1g0508 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Sto1g0508 422 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0508 Sto-Chr1 4673970 4682833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0508 69 361 Glycoside Hydrolase AT3G07070 51.689 7.79e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto1g0508 PK_Tyr_Ser-Thr 9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0508 - - gmx:100790454 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0092 9 813917 820196 Sto1g0508 1 4673970 4682833 ECH
Sto3g1033 3 7120384 7122358 Sto1g0508 1 4673970 4682833 ECH
Sto1g0508 1 4673970 4682833 Sto1g0508 1 4673970 4682833 ECH
Sto1g0508 1 4673970 4682833 Sto5g0968 5 6516383 6522543 ECH