Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0498 ATGATAAGTACTGCAAGTGCAAGAAATTATAGGTCTCCTTTCACAGCAACACAGTGGCAAGAACTTGAGCAACAAGCACTTATCTTTAAATATATGGTCTCAGGGACTCCTATCCCACCTGATCTCATTTACTCTGTCAAAAGAAGTctggattcttcttcttcttcttcaaggcTCTTCCCCCTCCACCCCATTGGATGGGGATGCCTTGAAATGGATTATGGCAGAAAAGTAGATCCTGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCTTATCCAGACTCAAAGTACTGTGAGAGGCACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTttcttcaacaacaacaacaacaaacataTCAGCAAACACCACATCACAAGCAATTTCATCATATAATAATAGCAGAAACCCCAATACATCCTCCACTacctcttctttccctttttctctGTTGCCTTCATCTATGCCCTCTGATTCCCAGCCATATTCCCATCCTTACCAAGATTCATCTTTTAATCCCTTGCTTTTCACCCATTCAACCACTTCTAGTTCTAGACCTCTTGACTCTGATTTTCCCCATCAAAACAGCAATACCCACCATCTATTTTTGGACTCTGGATCTTATTCTAGGGATGAGAAGGACTATAGGCATATTTATGGAATGAAGGAGGGTGTGGATGAGAGGGCTTTCTTCCCGGAAGCCTCAGAGAGTGCTAGGAGCTTTACTAATTCATATCAACAGTTATCAATGAGCTCCTATAGACCCTATTCAAACTCCCAGTTTCAAAACATAAATGATAATCCAAGGCAACAACAACAAGAACAACATTGTTTTGTTCTAGGAAGCGACTTCAAATCACCTGGATCAataaagaatgagaatgaatcTGATGAGATGACTCTGAGACCCCTTCATCATTTCTTTGGGGAGTGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTTGCTTCAAATTCCAGAGTCCCCAATGGTGATGATCTATAG 1044 0.387 MISTASARNYRSPFTATQWQELEQQALIFKYMVSGTPIPPDLIYSVKRSLDSSSSSSRLFPLHPIGWGCLEMDYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSTTTTTNISANTTSQAISSYNNSRNPNTSSTTSSFPFSLLPSSMPSDSQPYSHPYQDSSFNPLLFTHSTTSSSRPLDSDFPHQNSNTHHLFLDSGSYSRDEKDYRHIYGMKEGVDERAFFPEASESARSFTNSYQQLSMSSYRPYSNSQFQNINDNPRQQQQEQHCFVLGSDFKSPGSIKNENESDEMTLRPLHHFFGEWPPKNTDSWLDLASNSRVPNGDDL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0498 347 MobiDBLite consensus disorder prediction 120 217 - -
Sto1g0498 347 MobiDBLite consensus disorder prediction 108 219 - -
Sto1g0498 347 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto1g0498 347 ProSiteProfiles WRC domain profile. 79 123 IPR014977 -
Sto1g0498 347 Pfam QLQ 13 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto1g0498 347 Pfam WRC 80 122 IPR014977 -
Sto1g0498 347 PANTHER - 5 343 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sto1g0498 347 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 5 343 - -
Sto1g0498 347 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0498 Sto-Chr1 4546584 4547808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0498 2 323 GRF Transcription Factor Family AT3G13960 41.005 3.69e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sto1g0498 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0498 - - vun:114166369 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0498 1 4546584 4547808 Sto1g0498 1 4546584 4547808 ECH