Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0492 ATGAAGCTCTTAGCAATGCGATTGAGAAGAGGATTGCCTAGgtggtcTTTAATTGCTGGACGATTACCAGGACGAACAGACAATGAAATCAAGAACTATTGGAATACAATTATCGGAAAAAAGATTCAAAACAAAAACTCCAAATTATCCCCTCCTTCGAGCGGTGCATGTAGCCCATCGAGCTCCACGGGCCAAAACCTCGCCAAAAAAGCCCGACCATTGAGCATCGGGTCGGATGTGGTTCACACCAAAGCAACAAGGTGCACCAAGGTAATAGTGAGCAAAGAAATTGAACCATTAAtggttaattataataataataatagtgatcGTTACGAGAAAATAATAGAGACATCATCGTCACTATCACTATTACCACCTTTTGGAAATTACGAGGAAGAGGGAATTAACAACAATAATGCTTTGGATTTCATGGCGGATTTTGAGATGGACGAGAGTTTCTTTACGGGTCTTTTGAATATGGATCTATCCTCCGAACTGCCATCTTGTTTTGAGAATAAAGTTGATGATCAAGTGGAAGTCGTCAATAGTAATGACGAGACTAGTACAAATATTATTACTCATCATCGTCCTTTGTCTCCTCCAACATATTCTAATAATGATAACGCACCCGAGTTCTACGACAATTCTTTGCATGGTAGCTCCCAAGATTTTCAATCAATGTCGGGAATAATGAAGGAGAATGAATTTGATTGGCTTTCTACGTTTTAG 732 0.3798 MKLLAMRLRRGLPRWSLIAGRLPGRTDNEIKNYWNTIIGKKIQNKNSKLSPPSSGACSPSSSTGQNLAKKARPLSIGSDVVHTKATRCTKVIVSKEIEPLMVNYNNNNSDRYEKIIETSSSLSLLPPFGNYEEEGINNNNALDFMADFEMDESFFTGLLNMDLSSELPSCFENKVDDQVEVVNSNDETSTNIITHHRPLSPPTYSNNDNAPEFYDNSLHGSSQDFQSMSGIMKENEFDWLSTF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0492 243 Gene3D - 1 59 - -
Sto1g0492 243 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 14 195 - -
Sto1g0492 243 SUPERFAMILY Homeodomain-like 3 46 IPR009057 -
Sto1g0492 243 PANTHER MYB-RELATED PROTEIN 308-LIKE 14 195 - -
Sto1g0492 243 CDD SANT 11 38 IPR001005 -
Sto1g0492 243 MobiDBLite consensus disorder prediction 44 71 - -
Sto1g0492 243 ProSiteProfiles Myb-like domain profile. 1 38 IPR001005 -
Sto1g0492 243 MobiDBLite consensus disorder prediction 192 219 - -
Sto1g0492 243 MobiDBLite consensus disorder prediction 44 69 - -
Sto1g0492 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 42 IPR017930 -
Sto1g0492 243 Pfam Myb-like DNA-binding domain 11 37 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0492 Sto-Chr1 4475874 4478535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0492 4 42 MYB Transcription Factor Family AT3G13540 72.500 2.55e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto1g0492 Myb_DNA-binding 2.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0492 K09422 - jre:109001985 125.176