Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0479 ATGTTGACTTGCATTGCTTGTTCGAAGCAGCTTAATAACAAAGGATCTCTTCCTCAGCAAGATGAGCACGAAGAAGTTGTTGGAACTCCCAGCACCAAACAAGCCATTAAGGCCCTCACTGCTCAgATCAAGGACATGGCAGTGAAAGCTTCTGGGGCATACAGAAATTGCAAGCCTTGTTCAGGATCTTCCAATGGGAATAATAGGAACCACCACAACTATGCTGATTCTGATATGGCTTCAGATTCAGCAAGATTCCACTGGGCTTACAGAAGAACTGGCAGCTCCAACTCTACCCCAAGGCTTTGGGGGAAAGAGATGGAGGCAAGGCTGAAAGGGCTTTCGAGTGGCGAAGGAACACCGGCGTCGGTGAGTGGTCGAACCGAGTCTGTGGTGTTCATGGAGGAAGATGAGCCAAAGGAATGGGTTGCTCAGGTGGAGCCTGGTGTGCTTATCACCTTTGTGGCATTGCCTCAAGGTGGAAATGATCTCAAGCGGATACGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAAAGATGGTGGGCTGAGAATTTTGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTCCCAACTCCACCTAGATCTGAAGATGATCAGagCTTGAAGATTGAATCTGCTAGGGACAGCCCTGCGACGCCGCCTCTTATGAAACAAATGGGAACGGGATACTCCTCATCAGATTCTCTGGATCACCACTTGATGATGCAGTCGCGCCCTTGCTATGAAACTAGTGGTCTAGCTTCGACACCTAAACTTTCAGGAATCAGTGGGGCAAAAACCGAAACATCATCCTTAGATGGTTCTGTGAGGACAAGTTCCTCAAGAGAGGGAGATCAATCAGGCGAGCTCTCGATCAGCAATGCCAGTGACATGGAGACTGAATGGGTTGAACAAGATGAACCTGGAGTATACATCACCATCAGAGCACTGCCGGGTGGAGCCAGAGAACTCAGGCGGGTCCGGTTCAGTCGAGAACGGTTTGGAGAAATGCACGCGAGATTGTGGTGGGAAGAGAACCGGGCGAGGATACAAGAACAGTATTTGTGA 1098 0.4872 MLTCIACSKQLNNKGSLPQQDEHEEVVGTPSTKQAIKALTAQIKDMAVKASGAYRNCKPCSGSSNGNNRNHHNYADSDMASDSARFHWAYRRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVALPQGGNDLKRIRFSREMFNKWQAQRWWAENFDKVMELYNVQRFNQQAVPLPTPPRSEDDQSLKIESARDSPATPPLMKQMGTGYSSSDSLDHHLMMQSRPCYETSGLASTPKLSGISGAKTETSSLDGSVRTSSSREGDQSGELSISNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGEMHARLWWEENRARIQEQYL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0479 365 MobiDBLite consensus disorder prediction 261 309 - -
Sto1g0479 365 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Sto1g0479 365 MobiDBLite consensus disorder prediction 203 246 - -
Sto1g0479 365 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 365 IPR044532 -
Sto1g0479 365 MobiDBLite consensus disorder prediction 261 310 - -
Sto1g0479 365 ProSiteProfiles BRX domain profile. 310 365 IPR013591 -
Sto1g0479 365 Pfam Transcription factor BRX N-terminal domain 29 60 IPR027988 -
Sto1g0479 365 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 365 - -
Sto1g0479 365 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Sto1g0479 365 Pfam Transcription factor regulating root and shoot growth via Pin3 309 364 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0479 Sto-Chr1 4317274 4321095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0479 1 365 Major Intrinsic Protein MIP AT1G31880 47.644 3.57e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0479 - - gmx:100805480 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0479 1 4317274 4321095 Sto1g0479 1 4317274 4321095 ECH