Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0470 ATGTGCTTGAATGAGAGTGATGCCGTGGATGAATCGTCTCAAGAAGTTGAAGTACCGGCTGATATTGAATGGCATATGCTTGATAAATCCAAGTTTTTCTTCCTCGGTGCTGTCCTTTTCTCAGGGGTTTCGGCAGCTCTCTACCCGGTTGTTGTGTTGAAAACCCGGCAGCAAGTAGCTCAGTCCCAAGTTTCCTGCATCAGAACTGCATTTTCACTTATTAGGCATGAGGGTTTTCGAGCATTGTATAGAGGATTTGGTACTTCCTTGATGGGTACAATACCGGCTCGAGCACTATATATGGGTGCCTTGGAGGTTACCAAGAGTAATGTAGGGAGTGCCACAGTTAGGTTAGGGGTTGCAGAACCCACTGCGGCTGCTATTGCCAGTGCAGCTGCAGGCTTGAGTGCAGCCATGGCAGCTCAACTTGTATGGACTCCAGTTGATGTTGTGAGCCAGAGGTTAATGGTTCAAAATGTTGGTAATTTGAGTAATACTAAGGGCTCAGCACATCTATATGTCAATGGGATTGATGCTTTTCGGAAAATTCTGAACACGGATGGTCCTAGAGGGTTGTATAGGGGGTTTGGGATATCAATTTTGACCTATGCACCGTCAAATGCAGTTTGGTGGGCTTCATACTCTGTTGCACAGAGGCTGATTTGGGATGGAGTTGGGTACAATTGGTTCAAGAAATATGATGAAAGCAGCGATTCTGAAACTAATGTGTTGAGGCCTGATTCAAAAACCGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGTGGTATGTCTGCCTTAATTACCATGCCGCTGGACACTATCAAGACAAGACTTCAGGTCATGGATGGTGATGAGAATGGCCGACGAGGACCAACAGTTATGCAAACCGTTAGGAATTTGGTTAGGGAGGGTGGTTGGTTGGCCTGTTATAGAGGCTTGGGACCTCGATGGGCTTCGATGTCAGTGTCTGCAACAACAATGATCACTACCTATGAGTTTTTAAAACGACTTTCCACGAAGAATGAAGACGTTCTGACAAGATAG 1050 0.461 MCLNESDAVDESSQEVEVPADIEWHMLDKSKFFFLGAVLFSGVSAALYPVVVLKTRQQVAQSQVSCIRTAFSLIRHEGFRALYRGFGTSLMGTIPARALYMGALEVTKSNVGSATVRLGVAEPTAAAIASAAAGLSAAMAAQLVWTPVDVVSQRLMVQNVGNLSNTKGSAHLYVNGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWDGVGYNWFKKYDESSDSETNVLRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVMDGDENGRRGPTVMQTVRNLVREGGWLACYRGLGPRWASMSVSATTMITTYEFLKRLSTKNEDVLTR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0470 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 339 IPR018108 -
Sto1g0470 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 8 345 - -
Sto1g0470 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 345 - -
Sto1g0470 349 Pfam Mitochondrial carrier protein 127 222 IPR018108 -
Sto1g0470 349 Pfam Mitochondrial carrier protein 40 110 IPR018108 -
Sto1g0470 349 Pfam Mitochondrial carrier protein 253 343 IPR018108 -
Sto1g0470 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 220 IPR018108 -
Sto1g0470 349 SUPERFAMILY Mitochondrial carrier 25 336 IPR023395 -
Sto1g0470 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Sto1g0470 349 Gene3D Mitochondrial carrier domain 32 347 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0470 Sto-Chr1 4172176 4173225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0470 3 345 Chloroplast and Mitochondria Gene Families AT1G72820 73.988 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0470 K15121 - mnt:21396625 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0139 9 1279292 1280344 Sto1g0470 1 4172176 4173225 ECH
Sto1g0470 1 4172176 4173225 Sto1g0470 1 4172176 4173225 ECH