Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0468 ATGGCTATGATCTCTGTGATAAGAACAAAACGTAGCATAGTGAAACCATCAGAGAAAACACCATCAACCACACTTCCCCTTTCACCCATTGATAGATTAGCTGTTCTAAGGTGTAATGCTCGAACACTTCATGTGTTCAAACATGGCCCTGAGGCTGCATCACTTATTAGAAATGCATTGTCCATAGCATTGGTTCCTTACTATCCTCTTGCTGGAAGAATTGTAGAATCTGATGATGAAAATAGTGAAATCCAAATTGAATGTTCTGGGGATGGCGTGTGGTTCGTTGAGGCTTCGgctttgggaaccacacttgaTTCTGTGGATTACTTTGATGATGTTGAGTCTATTCCATATGATGATCTTCTTCCTGATGATGATCATGTTCCCCAGAGTGAATGCTTTGATCCCCTTGTGCAAATGCAGGTGACACAATTTGGTTGTGGAGGTTTCGTGATAGGCCTCATATTCTGCCATAGCATATGTGATGGCCTTGGTGCTGCACAATTTCTAAACGCCATTGGAGAAATAGCCAGAGGTCTTCAAAAACCCAGCATCAACCCTATTTGGCATAGGAACTTCTTTCCACCATCACCACCTTCTCTTCAAGAACAAGATCCTAATAAGCAAACTCCATTACCCAAACTACCCCTCGCCCCACCCCCAATATTACCACAATACCATCTCCAACACACAAACATAGACATACCAATACACCAAATCCACCTCCTCAAGCAACAATTCCACCACAAAACAGGAAAATATTGCTCTGCCTTTGAAATCGTAGCTTCGGCATTTTGGAGAAACCGAACGAAAGCCATAAATTTATTAGACCCGAACACTGAGGTCAAGTTGGTCTTTTTTGCAAATTGTCGTCACCTTTTGGACCCTCCTCTCCCTCGAGGGTTCTATGGTAATTGCTTCTTCCCCGTCACAATCACAACCCCATGTGGGTCCCTTACAAGGTCATCCATTATTGAGGTTATCGAGTTGATTCAAGAAGCGAAGGGTAGGCTGCCCTACGAGTTTGGGAAGTACTTGAAGGGCGGTGGGGAAGAAGATGACCCATTTGCCCCTCCATTGACGTATACGACGTTGTTTATTTCGGAGTGGGGACGGTTGGGATTTAACGATGTGGACTACAAGTGGGGGCCACCTGTACACGTGGTGCCCATACAAGGGTCTAGCATTATACCAGTTGGCATTGTGGGGTCCATGCCTCTCCCGAAAAAAGGGATTCGTTTGATGACGTGGTGTGTGGAGGAGGCTCATCGTGGGCCCTTCGTGGATGAGATGGTGTCTTGGACAAAGTAA 1314 0.446 MAMISVIRTKRSIVKPSEKTPSTTLPLSPIDRLAVLRCNARTLHVFKHGPEAASLIRNALSIALVPYYPLAGRIVESDDENSEIQIECSGDGVWFVEASALGTTLDSVDYFDDVESIPYDDLLPDDDHVPQSECFDPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAIGEIARGLQKPSINPIWHRNFFPPSPPSLQEQDPNKQTPLPKLPLAPPPILPQYHLQHTNIDIPIHQIHLLKQQFHHKTGKYCSAFEIVASAFWRNRTKAINLLDPNTEVKLVFFANCRHLLDPPLPRGFYGNCFFPVTITTPCGSLTRSSIIEVIELIQEAKGRLPYEFGKYLKGGGEEDDPFAPPLTYTTLFISEWGRLGFNDVDYKWGPPVHVVPIQGSSIIPVGIVGSMPLPKKGIRLMTWCVEEAHRGPFVDEMVSWTK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0468 437 Pfam Transferase family 6 392 - -
Sto1g0468 437 Gene3D - 221 428 IPR023213 -
Sto1g0468 437 PANTHER ACYL TRANSFERASE 4 4 433 - -
Sto1g0468 437 PANTHER ACYL TRANSFERASE 4 4 433 - -
Sto1g0468 437 Gene3D - 3 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0468 Sto-Chr1 4143037 4145104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0468 12 398 Monolignol Biosynthesis Gene Families AT5G48930 30.073 3.26e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0468 - - gmx:100783128 580.096