Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0447 ATGAGTATCATCGTGGAATCGCCACCGCTCCTCGCCGCCGATCCACGGAGACTCTTGCCGGAGATCGGGGTAGGAATTGAAACTCCTCAACCTATGAAACGAACTACGCACCGGACGATCAGATTCCGAATACACATACCACGGCCTTGGAGTTTCCGGATTCGATTTCACGAACTCTCGCGAAGAAGACGGTGTTTCGGAGAATCTTCGATCTTCATAAGAACGAGGGGTTTCATTGGTATTTCTACTAAGAAATCCACAGACAATGGCGAAGAGAACAAGAACGAGATTGAGGGAATCCCAGCTTTTCTTCACCAAATGGGGTTTGAATATGTGGGAAGTGAAAGAGAGCAATGTGGGGACTACGATGAACATACACACACAAGCAGTGACAAGAAGGAAGACGAGAAGAACGCCGGAGCTAAGGAAGAGAGAGTGCGAGCGGCGGAGACGGCGGCTCCGGCCGCCTCCGCCGTCGGATTGCAGCCAAAATGGGGTGTAACTTACCCGTCTTACCCACCTTTCCTTGTGACCAGAAGTGATCTTGAGCTTGATCCTCCATGCATCAACCTTGCCTATCCTCCTAAGGAGACTGAAAGTATGGATGAACAAACCTATTACCATACAAAAACGATAAATCACAAACTCACAGTTCAGAATCAtccaagaataaagaaaagGATCCGACCGGCAGCCCCAAACGCGCCTCTACAACCCCTACAAGGACCTCGAAGTTCCCATTCGAAACCTGTACCAGCTTCCAACCTCCCGAGTATTTTTTCGTCGAAGAGGATCGGCGTTTGTGAGAATCTCATCTTTTACACTGGCTGCGGCTACTTCGCCGGTGCCGTTGGTGGCGCCGCCGTTGGCCTCGTTGAAGGAGTCAAATCCTTTGAATCCGGTGACACCACGAAGCTCCGGGTTAACCGTGTACTGAACGCCTCCGGTCATTCGGGTCGGGCTTGGCGTAGACGACTTTGTGGCTTGGGGTTGCTTTATGCCGGAATTGAGAGCGGGATAGAGGCCGCGAGGGATACTGATGATGTATGGAATAGTGTGGCGGCGGGGCTTGGTACTGGAGCGTTGTATCGGGCTGTGAGAGGGGTGAGATCGGCGGCGGTCGCCGGAGCTGTTGGTGGAGTTGTGGTAGGAGTGGCAGTGACGGCGAAGCAAGCATTGAAACGTTACGTGCCAATATGA 1200 0.5167 MSIIVESPPLLAADPRRLLPEIGVGIETPQPMKRTTHRTIRFRIHIPRPWSFRIRFHELSRRRRCFGESSIFIRTRGFIGISTKKSTDNGEENKNEIEGIPAFLHQMGFEYVGSEREQCGDYDEHTHTSSDKKEDEKNAGAKEERVRAAETAAPAASAVGLQPKWGVTYPSYPPFLVTRSDLELDPPCINLAYPPKETESMDEQTYYHTKTINHKLTVQNHPRIKKRIRPAAPNAPLQPLQGPRSSHSKPVPASNLPSIFSSKRIGVCENLIFYTGCGYFAGAVGGAAVGLVEGVKSFESGDTTKLRVNRVLNASGHSGRAWRRRLCGLGLLYAGIESGIEAARDTDDVWNSVAAGLGTGALYRAVRGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0447 399 PANTHER BNAA06G11810D PROTEIN 254 397 - -
Sto1g0447 399 MobiDBLite consensus disorder prediction 229 252 - -
Sto1g0447 399 MobiDBLite consensus disorder prediction 120 145 - -
Sto1g0447 399 PANTHER TIM23 254 397 IPR045238 GO:0022857
Sto1g0447 399 Pfam Tim17/Tim22/Tim23/Pmp24 family 273 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0447 Sto-Chr1 3929239 3945030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0447 269 399 Chloroplast and Mitochondria Gene Families AT1G72750 67.176 9.49e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0447 K17794 - gmx:100813158 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0142 9 1298180 1298740 Sto1g0447 1 3929239 3945030 CCT