Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto1g0435 | ATGGAACCTCGAGTTGGTAACAAGTTCCGTCTTGGCCGGAAGATTGGTAGCGGATCGTTCGGGGAGATCTACCTTGGCACTAATATTCAGACTAATGAAGAGGTTGCAATTAAGCTTttctttttcttcttgacTCAGGAAAATATCAAGACCAAGCACCCCCAATTGTTGTATGAATCAAAGCTGTATAAAATTCTACAAGGAGGAACTGGAATTCCAAACATAAAATGGTTTGGTGTTGAGGGAGACTATAATGTGCTTGTAATGGATTTATTGGGGCCTAGTCTTGAGgatttattcaatttttgtaGTCGGAAATTGTCGCTGAAAACTGTTCTCATGCTTGCTGATCAAATGATAAATCGAGTTGAATTCGTTCATTCTAAATCATTTCTACATCGTGACATCAAGCCAGACAACTTCCTCATGGGCTTAGGGAGGCGTGCAAATCAAGTGTATGTCATTGACTTTGGTCTTGCTAAGAAATATAGAGACACCTCTACTCATCAGCATATTCCTTACagAGAGAATAAAAATTTGACAGGAACTGCAAGATATGCTAGCATGAATACTCATCTTGGAATTGagCAAAGCCGTAGAGATGACTTAGAGTCACTTGGATATGTTCTTATGTATTTTTTGAGGGGGAGTCTTCCTTGGCAAGGACTGAAAGCTGGTACCAAGAAGCAAAAGTACGAGAAGATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTTTGCCGTGGCTATCCTTCAGAATTTGCATCTTACTTCCATTACTGTCGGTCACTGCGGTTTGATGATAAACCAGATTACTCCTATCTGAAGAGACTTTTCCGCGACCTTtttattcgtgaagCATTTCAGTTTGATTATGTCTTTGATTGGACTATTTTGAAATATCAGCAATCTCAAATTGCCGCTCCTCCTGGCCGTGCTGTTGGTCCTGGTGCTGGACCAAGTTCGGGCATGCCACCACCTGTCGCAAATGCTGATAGAcatttaggtatatatatatTTTCTACTACTGGATGGTCTTCATCAGATCCTACACGTAGGAGAAATTCTGGGCCTATTATGAATGATGGTATCTTACCAAGACAAAAAGCCCCTGTTTCAAGTGACTTGAGTGGATCTAAAGATGCTACgTTGTCAAGTTCCCATCTCTTCCGGTCAAGTGGATCGCAAAGGCGAGGTGCTGTATCTAGCAGTCGTGATGGAGGTGTTGTTAGCAGTGAGACTGAACACTCCCGCCCTCTCGCTGTGGAAGCAAGTCCAGGAGCACTTCGTAAGGTCTCTGGCACGCAAAGAAGTTCACCCATTATATCATCAGAGCACAACCGAACTTCATCTGGGAGAAACACATCAAACACAAAGAATTTTGAGTCAACTCTCAGAGGTATTGAAAGCCTTCATTTCAACGATGAGAGGGTACAGTTTTAG | 1446 | 0.4066 | MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLFFFFLTQENIKTKHPQLLYESKLYKILQGGTGIPNIKWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREAFQFDYVFDWTILKYQQSQIAAPPGRAVGPGAGPSSGMPPPVANADRHLGIYIFSTTGWSSSDPTRRRNSGPIMNDGILPRQKAPVSSDLSGSKDATLSSSHLFRSSGSQRRGAVSSSRDGGVVSSETEHSRPLAVEASPGALRKVSGTQRSSPIISSEHNRTSSGRNTSNTKNFESTLRGIESLHFNDERVQF | 481 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto1g0435 | 481 | SMART | serkin_6 | 9 | 294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto1g0435 | 481 | MobiDBLite | consensus disorder prediction | 373 | 411 | - | - | |
Sto1g0435 | 481 | CDD | STKc_CK1_delta_epsilon | 8 | 289 | - | - | |
Sto1g0435 | 481 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 297 | IPR011009 | - | |
Sto1g0435 | 481 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 131 | 143 | IPR008271 | GO:0004672|GO:0006468 | |
Sto1g0435 | 481 | PANTHER | CASEIN KINASE 1-LIKE PROTEIN 2 | 1 | 466 | IPR030509 | GO:0004672|GO:0005524 | |
Sto1g0435 | 481 | Pfam | Protein kinase domain | 10 | 234 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto1g0435 | 481 | MobiDBLite | consensus disorder prediction | 432 | 462 | - | - | |
Sto1g0435 | 481 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Sto1g0435 | 481 | PANTHER | CASEIN KINASE-RELATED | 1 | 466 | - | - | |
Sto1g0435 | 481 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 312 | - | - | |
Sto1g0435 | 481 | ProSiteProfiles | Protein kinase domain profile. | 9 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto1g0435 | 481 | MobiDBLite | consensus disorder prediction | 346 | 462 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto1g0435 | Sto-Chr1 | 3789338 | 3794103 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto1g0435 | 8 | 220 | MAP Kinase Kinase Kinase | AT3G06030 | 27.602 | 2.61e-13 | 70.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Sto1g0435 | Pkinase | 1.9e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto1g0435 | K02218 | - | gmx:100778165 | 773.467 |