Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0435 ATGGAACCTCGAGTTGGTAACAAGTTCCGTCTTGGCCGGAAGATTGGTAGCGGATCGTTCGGGGAGATCTACCTTGGCACTAATATTCAGACTAATGAAGAGGTTGCAATTAAGCTTttctttttcttcttgacTCAGGAAAATATCAAGACCAAGCACCCCCAATTGTTGTATGAATCAAAGCTGTATAAAATTCTACAAGGAGGAACTGGAATTCCAAACATAAAATGGTTTGGTGTTGAGGGAGACTATAATGTGCTTGTAATGGATTTATTGGGGCCTAGTCTTGAGgatttattcaatttttgtaGTCGGAAATTGTCGCTGAAAACTGTTCTCATGCTTGCTGATCAAATGATAAATCGAGTTGAATTCGTTCATTCTAAATCATTTCTACATCGTGACATCAAGCCAGACAACTTCCTCATGGGCTTAGGGAGGCGTGCAAATCAAGTGTATGTCATTGACTTTGGTCTTGCTAAGAAATATAGAGACACCTCTACTCATCAGCATATTCCTTACagAGAGAATAAAAATTTGACAGGAACTGCAAGATATGCTAGCATGAATACTCATCTTGGAATTGagCAAAGCCGTAGAGATGACTTAGAGTCACTTGGATATGTTCTTATGTATTTTTTGAGGGGGAGTCTTCCTTGGCAAGGACTGAAAGCTGGTACCAAGAAGCAAAAGTACGAGAAGATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTTTGCCGTGGCTATCCTTCAGAATTTGCATCTTACTTCCATTACTGTCGGTCACTGCGGTTTGATGATAAACCAGATTACTCCTATCTGAAGAGACTTTTCCGCGACCTTtttattcgtgaagCATTTCAGTTTGATTATGTCTTTGATTGGACTATTTTGAAATATCAGCAATCTCAAATTGCCGCTCCTCCTGGCCGTGCTGTTGGTCCTGGTGCTGGACCAAGTTCGGGCATGCCACCACCTGTCGCAAATGCTGATAGAcatttaggtatatatatatTTTCTACTACTGGATGGTCTTCATCAGATCCTACACGTAGGAGAAATTCTGGGCCTATTATGAATGATGGTATCTTACCAAGACAAAAAGCCCCTGTTTCAAGTGACTTGAGTGGATCTAAAGATGCTACgTTGTCAAGTTCCCATCTCTTCCGGTCAAGTGGATCGCAAAGGCGAGGTGCTGTATCTAGCAGTCGTGATGGAGGTGTTGTTAGCAGTGAGACTGAACACTCCCGCCCTCTCGCTGTGGAAGCAAGTCCAGGAGCACTTCGTAAGGTCTCTGGCACGCAAAGAAGTTCACCCATTATATCATCAGAGCACAACCGAACTTCATCTGGGAGAAACACATCAAACACAAAGAATTTTGAGTCAACTCTCAGAGGTATTGAAAGCCTTCATTTCAACGATGAGAGGGTACAGTTTTAG 1446 0.4066 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLFFFFLTQENIKTKHPQLLYESKLYKILQGGTGIPNIKWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREAFQFDYVFDWTILKYQQSQIAAPPGRAVGPGAGPSSGMPPPVANADRHLGIYIFSTTGWSSSDPTRRRNSGPIMNDGILPRQKAPVSSDLSGSKDATLSSSHLFRSSGSQRRGAVSSSRDGGVVSSETEHSRPLAVEASPGALRKVSGTQRSSPIISSEHNRTSSGRNTSNTKNFESTLRGIESLHFNDERVQF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0435 481 SMART serkin_6 9 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0435 481 MobiDBLite consensus disorder prediction 373 411 - -
Sto1g0435 481 CDD STKc_CK1_delta_epsilon 8 289 - -
Sto1g0435 481 SUPERFAMILY Protein kinase-like (PK-like) 5 297 IPR011009 -
Sto1g0435 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Sto1g0435 481 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 466 IPR030509 GO:0004672|GO:0005524
Sto1g0435 481 Pfam Protein kinase domain 10 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0435 481 MobiDBLite consensus disorder prediction 432 462 - -
Sto1g0435 481 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sto1g0435 481 PANTHER CASEIN KINASE-RELATED 1 466 - -
Sto1g0435 481 Gene3D Transferase(Phosphotransferase) domain 1 1 312 - -
Sto1g0435 481 ProSiteProfiles Protein kinase domain profile. 9 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0435 481 MobiDBLite consensus disorder prediction 346 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0435 Sto-Chr1 3789338 3794103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0435 8 220 MAP Kinase Kinase Kinase AT3G06030 27.602 2.61e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sto1g0435 Pkinase 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0435 K02218 - gmx:100778165 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0147 9 1331578 1335914 Sto1g0435 1 3789338 3794103 CCT