Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0434 ATGGGACTACGAAATAAGTTAAAGGCAAGGATTAAGAGGAGCCATCTCTACACATTTGCTTGCCTTCGGCGGAGTGGAACTACCCATGATCGTCCTCATTCCCTTGAAGGTCCTGGTTTTTCAAGAATTGTACATTGCAACCAGTCTCATCTCCATGAAAAGGGCCCCCTATTTTATTGCCAGAATGATATATCAACTACAAAATACAATATTGGCACATTTTTGCCTAAGGCACTCTTTGAGCAATTCCGAAGGGTTGCTAACATATACTTCCTTGTGGCTGCATGCCTCTCAGCTTCTTCACTCTCACCATTCTCTCCTGTGAGCATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCTTTGGAAGATTGGCGGAGGTATCGTCAGGATGTCATAGTTAATCACCGGAAAGTTAGTGTCCATAGAGACAATGGTACTTTTGATTTCAAGCAATGGCAGGACATTAAGGTTGGGGATGTAGTCAAAGTAGATAAGGATGAATTTTTTCCTGCTGATTTGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACGAATTTGAAGGTGAAAAGATCTTTGGAGGTTACCATGCTTCTTTATACTGATGAAGCTTTCAAAGATTTCACAGGATCAATACGTTGTGAAGACCCAAATCCTAGTCTTTATACATTTGTTGGAAACTTTGAATATGAACGTGAGATTTATCCTCTTGATCCTAGTCAAATTCTCCTCCGAGATTCGAAGCTCAGGAACACTGATTTCATCTATGGGGTGGTCATTTTCACGGGTCACGAAAGCAAAGTCATGCAAAATTCTACAAGATCTCCTTCGAAAAGGAGCAAAATAGAGAAACAGATGGATTACATCATATACCTGCTTTTCTCTGTTCTTCTTTTGATATCCTTGGTCAGTTCAGCAATATTTGCTGTAAGGACTAGATTTCAAACAACAACATGGTGGTACTTAAGGCCCAAGGAATCTGAGGTTCAGTATAATCCGAATGATCCTGCATTGGCTGGGTTGAGTCATCTGGTTACTGCACTCATTCTTTATGGGTATTTGATACCCATATCACTTTATGTGTCAATTGAGGTTGTGAAGGTTTTACAAGCAACATTGATTAATCAAGACTTACTTATGTATCACGAAGAAACAGGAACTCCAGCTAATGCACGAACATCAAATTTGAATGAAGAGTTGGGCCAGGTGGACACTATACTTTCTGATAAGACTGGCACTTTAACCTGCAATCAGATGGATTTCTTAAAGTGCTCCATTGCTGGTGCTGCATATGGTTTGACTTCCAGTGAAGTTGAACTAGCTGCAGAAAAGCATATGGCTTCTAATCCAGGGGAAGAGGATGATTTCTTTAGTTCACCTAAGGATAAAGCACATGTTTCATGGGAAAACTTCGAACTGGAGACTGTTGTTACTTCTAAGGGTGATGAAGTTCAAAAGACTTCCATTAAGGGTTTCAGCTTTGAGGACAACCGCCTCATGAATTGTAATTGGCTGAAAGAGCCCAATCGTGATGTCCTTTTGTTGTTTTTCCGCATCCTAGCTGTTTGTCACACTGCCATTCCTGAGCTGAATGAGGAGACTGGAGTTTTAACTTATGAGGCTGAATCACCTGATGAAGGGGCTTTTCTTGTAGCTGCAAGAGAATTTGGTTTTGAGTTTTCTAGAAGAACTCAAGCTAGTGTTTTCATCCGTGAAAAGCTTTCACCTTCCGAACAAGCTGTTGAAAGAGAGTACAAAATCCTGAACCTATTGGACTTCACGAGCAAAAGAAAGCGAATGACGGTGATCGTGCGTGATGAGGAGGGCAGCTTGCTTCTAATGTGCAAAGGGGCTGATAGTATCATATTTGATCGATTGGCAAAGAATGGGAAGACGTATTTGGAGGCAACTACTAAACATTTGAATGAATATGGAGAAGGTGGCTTGAGAACACTAGCCCTGGCTTATAGAAAGCTTGATGAGGAAGAGTACAATGTCTGGAACAACGAGTTTCAGAAAGCCAAAATGAATGTCGGACCTGACAGAGAGTCGGTGCTCGAGCAGTTATCTGAAACGATGGAAAAAGAGCTGACTCTGGTTGGGGCCACTGCCGTGGAAGACAAACTGCAAAAAGGGGTACCCCAATGCATTGATAAACTTGCACAAGCTGGTCTCAAGATCTGGGTTTTGACTGGGGATAAAATGGAAACTGCCATCAACATTGGTTTTTCTTGTAGTTTGCTTAGACAGGGTATGAAGCAAATTTGTATAACTACTCAAGATTCAGACTCAATTCCCAATTTTGACAAAGAGGCCATCAAGGGGAACATTTTGAATCAAATTATCAATGCCTCACAAATGATAAACTTAGAGAAAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGACTCTGGCATATACTTTAGAGGATGATATGAAGCATCACTTTTTAGGACTGGCTGTTGATTGTGCTTCCGTGATTTGTTGTCGTGTGTCTCCCAAGCAAAAGGCGTTGGTAACAAGGTTAGTGAAAGAAGGTACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTTGGTATGATTCAAGAAGCAGATATTGGCATTGGTATCAGTGGGGTTGAAGGTATGCAGGTTTTTGTTTTGGAAGCATATGTGAGATTTCTAGAAATTGTGGAGCTCAAACTTGCAACTTCTTTTCAGGCGGTGATGGCTAGTGACTTTTCTATTGCCCAATTTAGATTTTTGGAGCGGCTTTTGGTAGTCCATGGACATTGGTGTTACAAGAGAATAGCGCAAATGATATGCTATTTCTTCTACAAAAACATAGCATTTGGCCTTACTATCTTCTATTTCGAGGCCATGACAAGCTTCTCTGGGCAATCGGTTTATGATGACTGGTATATGATATTGTTTAATGTTGTTCTTACTTCATTGCCTGTCATTTCACTCGGAGTTCTTGAACAAGATGTTTCTTCAGAAGTTTGCTTACAGTTTCCTACATTGTATCAGCAAGGCCCCAAGAACTTATTTTTTGACTGGCATAGAATATTAGGATGGATGGGCAATGGTCTTTATTGCTCCCTCATCATCTTCACTCTCAACATCCTCATCTTCTACGACCAAGCCTTCCGTTCCGACGGCCAAACCGCCGACATGGCAGCCGTTGGTACCACAATGTTCACTTGCATAGTTTGGGCTGTGAATTGCCAAATTGCCCTCACAATGAACCATTTCACATGGATCCAACTCGTACTCATCTCAGGAAGTATAGCCTTTTGGTACATCTTTCTCTTCATATATGGCATGCTTTCTCCATATTACTCCAAAACAGCCTACCAAATACTTCTTGAAGTTCTTGCCCCTGCACCCATGTACTGGATGACCACCCTTTTGGTGACATTTTCTTGCAATCTTCCTTATTATGCACACATATCATTGCAAAGATGTACAAGTCCCTTGGATCATCATATCATACAAGAGATCAAGCATTACAGGAAGGACATTGAAGATCAACGAATGTGGAGGAGGGAGAAGTCTAAAGCAAGACAAGAGACCAAGATTGGATTCACTGCAAGAGTGGAAGCAAAGATAAGGCAGTTGAGAGGGAAGCTGCACAAGAAGCAAGCCTCTTTGCCTATGATGTCTCCAACAAAATGA 3726 0.4128 MGLRNKLKARIKRSHLYTFACLRRSGTTHDRPHSLEGPGFSRIVHCNQSHLHEKGPLFYCQNDISTTKYNIGTFLPKALFEQFRRVANIYFLVAACLSASSLSPFSPVSMIAPLAFVVGLSMAKEALEDWRRYRQDVIVNHRKVSVHRDNGTFDFKQWQDIKVGDVVKVDKDEFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYTDEAFKDFTGSIRCEDPNPSLYTFVGNFEYEREIYPLDPSQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTRSPSKRSKIEKQMDYIIYLLFSVLLLISLVSSAIFAVRTRFQTTTWWYLRPKESEVQYNPNDPALAGLSHLVTALILYGYLIPISLYVSIEVVKVLQATLINQDLLMYHEETGTPANARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGAAYGLTSSEVELAAEKHMASNPGEEDDFFSSPKDKAHVSWENFELETVVTSKGDEVQKTSIKGFSFEDNRLMNCNWLKEPNRDVLLLFFRILAVCHTAIPELNEETGVLTYEAESPDEGAFLVAAREFGFEFSRRTQASVFIREKLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMCKGADSIIFDRLAKNGKTYLEATTKHLNEYGEGGLRTLALAYRKLDEEEYNVWNNEFQKAKMNVGPDRESVLEQLSETMEKELTLVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTQDSDSIPNFDKEAIKGNILNQIINASQMINLEKDPHAAFALIIDGKTLAYTLEDDMKHHFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGIGISGVEGMQVFVLEAYVRFLEIVELKLATSFQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAMTSFSGQSVYDDWYMILFNVVLTSLPVISLGVLEQDVSSEVCLQFPTLYQQGPKNLFFDWHRILGWMGNGLYCSLIIFTLNILIFYDQAFRSDGQTADMAAVGTTMFTCIVWAVNCQIALTMNHFTWIQLVLISGSIAFWYIFLFIYGMLSPYYSKTAYQILLEVLAPAPMYWMTTLLVTFSCNLPYYAHISLQRCTSPLDHHIIQEIKHYRKDIEDQRMWRREKSKARQETKIGFTARVEAKIRQLRGKLHKKQASLPMMSPTK 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0434 1241 Gene3D - 718 911 IPR023214 -
Sto1g0434 1241 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Sto1g0434 1241 Pfam Cation transport ATPase (P-type) 539 643 - -
Sto1g0434 1241 Gene3D - 115 291 - -
Sto1g0434 1241 SUPERFAMILY HAD-like 412 900 IPR036412 -
Sto1g0434 1241 SFLD p-type atpase 407 948 IPR044492 -
Sto1g0434 1241 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1236 - -
Sto1g0434 1241 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Sto1g0434 1241 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Sto1g0434 1241 Pfam Phospholipid-translocating ATPase N-terminal 44 111 IPR032631 -
Sto1g0434 1241 CDD P-type_ATPase_APLT_Dnf-like 61 1054 - -
Sto1g0434 1241 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 516 682 IPR023299 GO:0000166
Sto1g0434 1241 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1165 IPR023298 -
Sto1g0434 1241 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 1236 - -
Sto1g0434 1241 Gene3D - 434 463 IPR023299 GO:0000166
Sto1g0434 1241 SUPERFAMILY Calcium ATPase, transduction domain A 143 288 IPR008250 -
Sto1g0434 1241 Pfam Phospholipid-translocating P-type ATPase C-terminal 925 1174 IPR032630 -
Sto1g0434 1241 Gene3D - 421 433 IPR023214 -
Sto1g0434 1241 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 901 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto1g0434 1241 SFLD C1.7: P-type atpase like 407 948 - -
Sto1g0434 1241 Gene3D - 581 717 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0434 Sto-Chr1 3778044 3784855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0434 4 1238 Primary Pumps ATPases AT1G17500 70.679 0.0 1831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0434 K01530 - gmx:100819559 1921.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0149 9 1346701 1352792 Sto1g0434 1 3778044 3784855 CCT